Thermotomaculum hydrothermale: TTHT_1016
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Entry
TTHT_1016 CDS
T06993
Name
(GenBank) RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
thyd
Thermotomaculum hydrothermale
Pathway
thyd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thyd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TTHT_1016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thyd03021
]
TTHT_1016
Transcription machinery [BR:
thyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TTHT_1016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Alr2735_N
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
BBB32556
UniProt:
A0A7R6PNU8
LinkDB
All DBs
Position
complement(1062111..1062965)
Genome browser
AA seq
284 aa
AA seq
DB search
MAKNYKFFEEEEALKQYLKQINKIPPLTPDEEKELARRIKKGDKDALRRLVEANLKFVVS
IAKRYRGKGVPFMDLINEGNLGLIEAAKRFDPDKNVKFITYAVWWIRQAIISAIAEQSGI
FKISYKTLNLINNVGRKFNELQKELNRDPSPRELAEAMDIDELSLNSLLTTYGEHRSLDD
YISSDTDDLNYEDVIEQESVDDAETELIKKSFVEHLMESLSILSQRERDVLIHRFGLNGE
EPKTLQEIGKILNLSRERVRQIEKSALEKIRRSRYKNILKSYLN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaattacaagttttttgaggaagaagaagccttaaagcagtatttaaaacag
ataaataaaattccccctttaactccagatgaggaaaaagaactggcaagaaggattaaa
aaaggggacaaagatgctttaagaaggcttgtagaggctaatttaaagtttgttgtttca
attgccaaaaggtatagagggaaaggtgtaccttttatggatttgataaatgagggtaac
ttaggattgattgaggctgcaaaaaggtttgacccagataaaaatgtaaagtttatcaca
tatgcggtgtggtggattaggcaggctattatatctgcaatagcagagcagagtggaatt
tttaaaatttcctacaaaactttaaatttgataaacaatgttggaagaaagtttaacgaa
ttacaaaaagagttaaacagagacccatcaccgagggaattggctgaggctatggatata
gatgaattatctttaaattctcttttaaccacttatggtgaacataggtctcttgatgat
tatatatcgtcagatacagatgatttaaactatgaggatgttattgagcaggaaagtgta
gatgacgctgagactgagttaataaaaaaatcttttgttgagcatttaatggagtctctt
tctattttgagccaaagggagagggatgttttaatccacaggtttggtttaaacggagaa
gaacctaaaaccttgcaggagattggaaaaattttaaatctttcgagggaaagggtaagg
cagatagaaaaaagtgcccttgaaaaaattagaaggtcaaggtacaaaaatatattgaaa
agttatttaaattag
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