Thermotomaculum hydrothermale: TTHT_1094
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Entry
TTHT_1094 CDS
T06993
Name
(GenBank) RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
thyd
Thermotomaculum hydrothermale
Pathway
thyd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thyd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TTHT_1094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thyd03021
]
TTHT_1094
Transcription machinery [BR:
thyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TTHT_1094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Spectrin_SYNE1
Sigma70_r4_2
Apolipoprotein
DUF6659
Motif
Other DBs
NCBI-ProteinID:
BBB32631
UniProt:
A0A7R6PNZ6
LinkDB
All DBs
Position
complement(1143591..1145270)
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AA seq
559 aa
AA seq
DB search
MAKNSKYSHIKEYAISKGSISFDELNSMLDPDATIEEIDKLIGDIKAGGVDLVDFEKEDG
DYYGTGELDEVEENEETEEDIEHKTFAPGEVDRVNDPVRLYLKEMGNVPLLTREEEIYYA
KEIEAGMKTTLKALSRMRVVVPYLLKLGELIEEKPFHLKEVIGLDDDAFGEDNEALNFAL
QIFRNIRVEEGKLQSLIQKYNDTVDEEERKKLFSQINRQKVRVSREIRKLKLNFHHMHKL
IEMVNETHKELHNYNRRIKEIKEKLEKPAYEKLRPKLTKELVELEGKLNKRLNELGTTLE
IFDKNYKLLKEGENRTEKAKNALIEANLRLVVSIAKKYTNKGLQFLDLIQEGNIGLMKAV
EKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKVIRVSRQLVQELGR
EPSPEEIALKMEMSVDKIRKIMKIAQDPISLETPIGEEEDSHLGDFIEDEKNVSPIDNVI
DLDLKNSVLEVLKTLPEREAKVLEMRFGLTEDGEHTLEEVGQLFAVTRERIRQIESKALR
KLRHPSRSRKLKAFLEGMR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaacagcaagtactcacacattaaagaatacgccataagtaaggggtcaatc
tcatttgatgaattaaatagtatgcttgaccctgatgcaacaattgaggagattgataaa
ttaataggggatattaaagctggtggagttgatttggttgattttgaaaaggaagatggt
gattattatggtacaggtgaattagacgaggtagaagagaacgaagaaactgaagaagat
attgaacataaaacctttgctccgggagaagttgacagggtaaatgaccctgtaaggctt
tacctcaaggaaatgggcaatgtgcctcttttaacaagggaagaggaaatttattatgca
aaagaaattgaagctggaatgaaaactaccttaaaagccctgtcaagaatgagggttgtt
gttccctacttgttaaaattaggagagttaattgaagaaaagccattccaccttaaagaa
gtaataggtttagacgatgatgcttttggtgaggataatgaggcactaaattttgctttg
cagattttcagaaatattagagtagaggaaggtaaacttcaaagtttaatacaaaagtat
aatgatactgttgacgaagaggaaaggaaaaagctcttttctcaaattaacaggcaaaag
gtaagggtttcaagggaaataagaaaattaaaattaaattttcaccatatgcacaaactt
attgagatggtaaatgaaacacataaagagcttcacaactacaatagaagaataaaagag
ataaaagaaaaacttgaaaagcctgcatatgaaaaattaagacctaagttgacaaaagaa
ttggttgagcttgaggggaaattaaataaaaggttaaatgagttaggcacaacccttgaa
atttttgataaaaattacaaacttttaaaagagggggaaaatagaactgaaaaggccaag
aatgctttaattgaagcaaatttaaggctcgttgtttcaattgctaaaaagtacaccaat
aaaggtttgcagtttcttgacttaatccaggaaggaaatattggtttaatgaaggcggta
gaaaaatttgaatacagaagagggtataagttttccacatatgcaacatggtggattagg
caggctattacaagggctattgcagaccaggcaagaacaataaggattcctgtgcacatg
attgaaacaattaataaggtaatcagggtttcaagacaacttgtccaggagcttgggaga
gaaccttctccagaagaaattgctctaaaaatggaaatgtctgtggacaaaatcagaaag
ataatgaaaattgcacaggacccaatttctcttgaaactcctattggtgaagaggaagat
tcacatcttggagattttattgaagatgaaaagaatgtgtctcccattgataatgtaatt
gatcttgatcttaaaaactctgttttagaggtattaaaaacacttccagagagggaagca
aaagtgctggaaatgaggtttggtttaactgaagatggtgagcacacccttgaggaagtt
gggcaattatttgcagtaacaagggaaagaatcaggcagattgaatcaaaggcgttaaga
aagctcagacatccatcgaggagtagaaaactaaaagccttccttgaaggtatgaggtaa
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