Thermotomaculum hydrothermale: TTHT_1141
Help
Entry
TTHT_1141 CDS
T06993
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
thyd
Thermotomaculum hydrothermale
Pathway
thyd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TTHT_1141 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thyd03400
]
TTHT_1141 (uvrB)
DNA repair and recombination proteins [BR:
thyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TTHT_1141 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TTHT_1141 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
P-loop_SecA
Kinesin
PMT2_N
nSTAND3
NACHT
DUF2963
Microtub_bd
HEM4
DUF87
Motif
Other DBs
NCBI-ProteinID:
BBB32673
UniProt:
A0A7R6PFA6
LinkDB
All DBs
Position
1192734..1194719
Genome browser
AA seq
661 aa
AA seq
DB search
MNRFKLVSDYKPTGDQPEAIEKILKSLEKGNRYQTLLGVTGSGKTFTMANIISKWQKPTL
IIAHNKTLAAQLYNEFKTFFPENAVEYFVSYYDYYQPEAYVPESDLYIEKDSSINEEIEK
LRLSATKSLLTRRDVIVIASVSCIYGLGSPREYKNMAISIAQGEIKNRGRLLMELAQIQY
VRSMFESEAGTFRVRGDTIEVFPSYQDEGIRIEMFDDEIESIKLFDPLTGKTIKKLDSVE
IYPSSHYVTSKDRLMLAIERIKEELKERLDFFEKKGRLLEAQRLAQRTNYDIEMLLETGI
CKGIENYSRHLEGRNEGEPPFTLLDYFPDDFLVIVDESHITIPQIGGMYRGDRSRKETLV
EFGFRLPSALDNRPLRFEEFEEKINQILFVSATPGKYEIEKTGGITAEQIIRPTGLIDPK
IIVKPAKNQVDDLLEEIRKRVEKNERVLVATLTKKMAENLSEYLIEAGIKAKYLHSDIDT
LERVEILKNLRKGEFDVLVGVNLLREGLDLPEVSLVAVLDADKEGFLRSETSLIQVSGRA
ARNVNGTAIFYADRMTKAIENTIKESERRRKKQIEYNKKHGITPKTIVKSYENILSSIFE
RDYFTVKLEEESKIEDYSREALLEHIKKLEKEMKKLAKDLKFEEAAKIREKIKELKEKAV
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaatagatttaaacttgtttccgattacaaaccaactggagaccagccagaggcaata
gaaaaaatactaaaaagccttgagaaagggaacaggtatcagactcttcttggagttaca
ggctctggaaaaaccttcacaatggcaaacataataagcaaatggcaaaaaccaaccctg
ataattgcccacaataaaacacttgcagcccagctttacaatgagtttaaaacatttttc
cctgaaaacgctgttgaatactttgtttcttactatgattattaccagccagaagcatat
gtgcctgaaagcgatttgtacattgaaaaagactcttcaataaatgaagagattgaaaaa
ttaaggctatcagccacaaaaagccttttaacaagaagagatgtaattgttattgcatct
gtttcctgcatatacggtttaggctccccaagggaatacaaaaatatggctatttcaata
gctcaaggagaaattaaaaacagaggaaggcttttaatggaacttgcacaaatccagtat
gtaagaagtatgtttgaatcagaggcaggcactttcagggtaaggggagatacaattgag
gttttcccctcataccaggatgaggggataaggattgaaatgtttgacgatgagattgag
tcaattaaattatttgaccctcttacaggaaaaacaattaaaaaactggattcagtggaa
atttatccatcctctcactatgtaacaagcaaagataggctaatgcttgcaatagagagg
attaaggaagagttaaaggaaaggcttgatttttttgaaaaaaagggaagacttcttgaa
gcacaacgacttgcccagagaacaaattacgacattgaaatgttattagaaacagggata
tgcaagggaattgaaaactattcaagacaccttgagggaaggaatgagggagaaccaccc
tttacacttttagactacttcccagacgattttcttgttattgttgacgaaagccacata
acgattccccagatagggggaatgtacaggggggacagaagcagaaaggaaaccctggtt
gagtttggcttcaggttaccttcagcccttgacaacaggccattaaggtttgaagagttt
gaagaaaagattaaccagattctatttgtctctgctacgcctggaaagtatgaaatagaa
aaaacagggggaattacagctgagcagataataaggccaacagggttaattgaccctaaa
attattgtaaaacctgcaaaaaatcaggttgatgacctgcttgaagaaataagaaaaagg
gttgaaaaaaatgagagggtgcttgttgcaaccttaacaaaaaaaatggctgaaaattta
agcgagtatttaattgaagcaggaataaaagctaaataccttcattcagacatagatacc
cttgaaagggttgaaattctcaaaaatttacgaaagggagaatttgatgtgcttgttgga
gtaaacctattgagggaaggacttgatttgccggaggtttcattggttgcagtgcttgat
gcagacaaagagggatttttgagaagtgaaacttcccttattcaggtttcaggaagggct
gcaagaaatgtaaacggcacagcaatcttttatgcagatagaatgacaaaggctattgaa
aacacaattaaagagagtgaaagaaggagaaaaaaacagattgagtacaacaaaaaacac
ggtataacaccaaaaacaattgttaaatcttacgaaaatatactctcttcaatatttgag
agggattactttacagtaaaacttgaagaggaaagcaaaattgaggattactcaagagag
gctttattagagcatattaaaaaacttgaaaaagagatgaaaaaacttgctaaagatttg
aaatttgaagaagctgcaaaaataagggaaaaaataaaagaattaaaagaaaaagctgtt
atgtaa
DBGET
integrated database retrieval system
