Thermotomaculum hydrothermale: TTHT_1563
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Entry
TTHT_1563 CDS
T06993
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thyd
Thermotomaculum hydrothermale
Pathway
thyd03030
DNA replication
thyd03410
Base excision repair
thyd03420
Nucleotide excision repair
thyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TTHT_1563 (polA)
03410 Base excision repair
TTHT_1563 (polA)
03420 Nucleotide excision repair
TTHT_1563 (polA)
03440 Homologous recombination
TTHT_1563 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thyd03032
]
TTHT_1563 (polA)
03400 DNA repair and recombination proteins [BR:
thyd03400
]
TTHT_1563 (polA)
Enzymes [BR:
thyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TTHT_1563 (polA)
DNA replication proteins [BR:
thyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TTHT_1563 (polA)
DNA repair and recombination proteins [BR:
thyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TTHT_1563 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TTHT_1563 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
mCpol
Motif
Other DBs
NCBI-ProteinID:
BBB33057
UniProt:
A0A7R6PUR2
LinkDB
All DBs
Position
1628704..1631355
Genome browser
AA seq
883 aa
AA seq
DB search
MEKSFYIIDAYAHIFRSYYAIRNIDNNAIYGFTRILIKLFKDYNPEYAVCVFDTGKPTFR
HEMFEDYKATRKKMPEDLAMQIPKIKEIVDAFNIERLEIEGLEADDLIATLSYKASQEGF
KVYIVSSDKDLFQLVNDNVFILDPKKDYKIYDSKGIEEFFGVSPDQVADVLALMGDASDN
IPGAKGIGEKTAKKLIKEFGSLDRLYNNLYLVKGKTKEKLEKSRENVFLSKKLVELDIHR
NLNIDIESFRVKQPDFEKLYSIFRELKFNSLIKELELEGKTAHKEEEKEYVLIDTIEKLK
EFIKILQKQKFVAFDTETCNLDIVSPKLAGISFSFEKNKGYYIPLISENKEILPTQTVIS
LLKPVLENEKIKKCGHNLKYDYQVLKGHGIEVKGIEDDSMILSYLLNSNLRQHNLDDAAR
DYLDYTTIKYKELTEDKKLSFCDLPAEKVYKYSSEDSDVALQLTNLLKNKVKELNMEDLY
KNIEMPLVKILAEMELNGVLVDRDFLEKLSKEFEEKLKKLEMEIFEEAGCQFNINSPKQL
GEVLFEKLQLPVLKKTKKTKSYSTSHEILEQLANDFKIARLIVDYRKFGKLKSTYVDALP
KLIHPKTGRIHTSYNQTVTATGRLSSSNPNLQNIPARTEEGKRIREAFIAPEGYKLISAD
YSQIELRVLAHLSGDKTLIEAFKKGADIHSETASQLFGVSADKVTSELRAKAKAINFGII
YGKKEYSLSQELGITPKEAKDFIQSYFEKMPSVKEFIENTIENAKKEGFVKTMFGRIRYV
PEFKSNNFNIRQHGERIAINTVIQGTAADIIKIAMINLDKRLRDLKESAKLIMQVHDELI
FEVKEENIEKISKIVKEEMENAADLTVPLTVNISIGNNWAEAK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagtttttacattattgacgcttacgcacacattttcagaagttactatgca
ataaggaatattgacaacaatgcaatttacggatttacaaggattttaattaaacttttt
aaagattacaatcctgaatacgctgtctgtgtttttgatactggaaaaccaacattcagg
catgagatgtttgaagattacaaagcaacaaggaagaaaatgccggaagatttggcaatg
caaatacctaaaattaaggaaattgttgatgcatttaatatagaaaggcttgaaattgag
gggcttgaggctgacgatttaattgcaaccctatcttacaaagcctctcaagagggcttc
aaggtttacatagtttcaagcgacaaggatttgtttcaactggtaaacgacaatgttttt
attttagaccctaaaaaagattacaaaatttatgattcaaagggaattgaagaattcttt
ggagtgtccccagatcaggttgctgatgttcttgctttaatgggcgatgcatcagacaat
atcccgggggcaaaaggaattggcgaaaagactgcaaaaaaactcataaaagagtttgga
agcctggacaggctttacaacaacctttaccttgtaaaggggaagacaaaagaaaaactt
gaaaaaagcagagaaaatgtttttctttcaaaaaaattagtagaacttgatatacacagg
aatttaaacattgatattgaaagttttagggtaaaacagcctgattttgagaagctttat
tcaattttcagggaattaaagtttaattcattaataaaagaattggaattggaaggcaaa
acagctcacaaagaagaagagaaagaatatgttttaatagatacaatagaaaaactaaaa
gagtttataaaaatacttcaaaagcaaaagtttgttgcctttgacacagaaacctgcaac
cttgatattgtatcgccaaaacttgcaggaatttccttctcttttgaaaaaaacaaagga
tactatatccccctgatttcagaaaacaaagagattttaccaacacaaactgttatttct
cttttaaaacctgttttagaaaacgaaaaaataaaaaaatgcggacacaatttaaagtat
gattaccaggtcttaaagggacacggaattgaggttaaggggattgaagacgattcaatg
attctctcttaccttttaaactcaaacctgagacaacacaatttagacgatgctgcaagg
gattaccttgattacaccacaataaaatacaaagagttaacagaggataaaaaactctcg
ttttgcgatttgcctgctgaaaaggtttacaaatactcctccgaagactcggatgttgca
cttcaacttacaaaccttttaaaaaacaaggttaaagagttaaatatggaggatttgtat
aaaaatattgaaatgccacttgttaaaattcttgctgaaatggaattaaacggagtgctt
gttgatagagattttcttgaaaaattgtcaaaagagtttgaggaaaaacttaaaaagctt
gaaatggaaatatttgaagaggcaggctgtcagtttaacataaactctccaaagcagtta
ggagaggtgctttttgaaaaacttcagcttcctgttttgaaaaagactaaaaaaaccaaa
tcatactcaacaagccacgaaatattagaacagcttgcaaatgatttcaaaattgcaagg
cttatagttgattacagaaaatttggaaagcttaaatcaacctatgttgatgcacttccc
aagctgattcaccctaaaacaggaaggattcacacaagttacaatcagactgtaactgca
acaggcaggctttcttcatcaaaccccaaccttcaaaacatccctgcaagaacagaagag
gggaaaagaataagggaagcatttattgcaccagaaggttataaacttatttcagcagac
tattcccagattgagttaagggtattagcccacctttctggtgataaaacacttatagag
gctttcaaaaagggtgctgatatccatagcgaaacagcatctcaactattcggggttagc
gcagacaaggttacctctgagttaagggcaaaggcaaaggcaataaactttggaataatt
tacgggaaaaaggagtactcactatcgcaggaattgggaataactcccaaagaggcaaag
gattttattcagtcttactttgaaaaaatgccttcagttaaagaatttatagaaaacaca
attgaaaacgcaaaaaaggaagggtttgtaaaaacaatgtttggaaggataaggtatgtg
cctgaatttaaatcaaacaactttaacataaggcaacacggggaaagaattgcaataaac
acggtaattcagggaactgccgcagacataataaaaattgcaatgataaaccttgataaa
agattaagggatttaaaagaaagtgcaaaacttattatgcaggtacacgatgaattgatt
tttgaagtaaaagaagagaacatagaaaaaatttcaaaaatagtaaaagaagagatggaa
aatgccgcagatttaaccgtgcctttaactgtcaacatatcaattggaaacaattgggct
gaagcaaagtag
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