Tepidibacter hydrothermalis: P4S50_01635
Help
Entry
P4S50_01635 CDS
T09528
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thyr
Tepidibacter hydrothermalis
Pathway
thyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P4S50_01635 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thyr03019
]
P4S50_01635 (recQ)
03400 DNA repair and recombination proteins [BR:
thyr03400
]
P4S50_01635 (recQ)
Enzymes [BR:
thyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P4S50_01635 (recQ)
Messenger RNA biogenesis [BR:
thyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P4S50_01635 (recQ)
DNA repair and recombination proteins [BR:
thyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P4S50_01635 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
AAA_30
IGFBP
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WFD12308
LinkDB
All DBs
Position
396048..398165
Genome browser
AA seq
705 aa
AA seq
DB search
MMDIQKNILKKYFGYDRFRKGQEEVINSILQGNDTIAIMPTGAGKSLCYQVPAMALSGIT
VVISPLISLMKDQVDTLNEIGIKSTYINSTLTNLEITERLFDAKDEEYKLVYVAPERLNS
GEFLNFLNEAKVSLIAIDEAHCVSQWGHDFRPSYTRISQTIENLNERPIVCAFTATATSE
VKDDIKKLLKLRDPNEYISGFDRENLTFSVIRGENTKKFICDFVENNKEQTGIVYTSTRK
AAESIYEALINKGHRAGIYHAGLTDEQRSKMQEDFSYDNINVIVATNAFGMGIDKSNVRY
VIHNNMPKNMESYYQEAGRAGRDGEKSECILLFNPRDTQTQKFFIEETIHNVERKEYEYR
RLQDMIDYCHTSNCLRKSILEYFGEENVDDKCGNCSVCNDNEEKEDITVLAQKIISCVYR
MQEKYGAILIAEVLRGSKNQKVLKFGLDKLSTYSIIKEYTVKEIQEIINKLIADDYLVLS
QGQYPVVKMNKRSIDVLKGKEQVFMKINKKVKKIANTGNELFDILRDLRKEISTKENIPP
YIVFSDASLKEMSTYMPEGEDEFLTIKGVGQSKLEKYGDIFMQKIDEYRKSKNIKTKEVK
QEKENKKEKIKSHVITFNMYNENKSIEEIASERGIEPSTAKEHLFRCAIEGMEVDLDQLL
PEEYEKQIEEVTNKIGYNGLKTIKENLPDEISYFHIKVFLHKVKG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ataatggatatacaaaaaaatatattaaaaaaatattttggatacgatagatttagaaaa
ggacaagaagaggttataaatagtatattacaaggaaatgatacgatagcaataatgcct
acgggtgctggtaaatctctttgttatcaggttccggccatggcactatcaggaataaca
gtagttatttctccactaatatcattaatgaaagatcaagttgatacacttaatgaaata
ggaataaaatcaacatacataaatagtacattaacaaatcttgaaataacagagagatta
tttgatgcaaaagacgaagaatataaactagtttatgttgcaccagagagacttaactca
ggtgagtttttgaactttttaaatgaagcaaaagtatctttaatagcaatagatgaggct
cactgtgtatctcaatggggacatgattttagaccaagctacacaagaattagtcaaacc
atagagaatttaaatgaaagaccgatagtttgtgcatttacagcaactgctacaagtgaa
gttaaagatgatattaaaaaattattaaagcttagagatcctaatgaatacataagtgga
tttgatagagaaaaccttacattttcagttataagaggagagaatactaaaaaattcata
tgtgattttgttgagaataacaaagaacaaactggtatagtatatacatctacaagaaaa
gcggcagagtctatatatgaagcattaattaataaaggacatagagcaggtatataccat
gcaggtcttacagatgagcaaagaagcaagatgcaggaggatttttcatatgacaatata
aatgttattgtagcaactaatgcattcggtatgggaatagacaagtcaaatgtaagatat
gtaatacacaataacatgcctaaaaatatggaaagttattatcaagaagcgggacgtgca
ggtcgtgatggagaaaaaagtgaatgtatacttttattcaatccaagagatactcaaact
caaaaattctttatagaagagactatacacaatgtagaaagaaaagaatatgagtataga
agacttcaagatatgatagattactgccatacatcaaactgcttgagaaaatctatacta
gagtattttggtgaggaaaatgtagatgataagtgtggaaactgtagtgtatgtaatgat
aatgaagaaaaagaagatataacagtacttgctcaaaaaataatttcttgtgtttataga
atgcaggagaagtacggagctatacttatagcagaggttttaagaggatctaagaatcaa
aaggtattaaagtttggattagataagttaagtacttattcaataataaaagaatatacg
gtaaaggaaatacaagagataataaacaagttaatagctgatgattatcttgtcttgtcg
caaggtcaatatcctgttgtcaaaatgaacaaaagatctatagatgttttaaaaggtaag
gaacaggtctttatgaaaataaataaaaaggtaaagaaaatagccaacactggaaacgag
ctatttgatatattaagagatcttagaaaagaaatatctacaaaagagaacatacctccg
tatatagtattttcagatgcatcacttaaagagatgagtacatatatgcctgagggtgaa
gatgagttcttgactataaaaggagtcggacaatcaaagcttgaaaaatacggtgatata
ttcatgcaaaaaatagatgaatatagaaaaagtaaaaatataaagactaaagaagttaaa
caagaaaaggaaaataaaaaagaaaaaataaaaagtcatgtgataacttttaatatgtat
aatgaaaataaaagtatagaggaaatagcaagtgaaagaggtatagaaccatccactgca
aaagaacatttatttagatgtgcaattgaaggaatggaagtggacttagatcaattactt
ccagaggaatatgaaaaacaaatagaagaagtaacaaataagattggatacaatggatta
aaaactataaaagaaaatttaccagatgaaataagctattttcatataaaagtgttttta
cacaaagtcaaaggataa
DBGET
integrated database retrieval system
