Tepidibacter hydrothermalis: P4S50_07290
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Entry
P4S50_07290 CDS
T09528
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
thyr
Tepidibacter hydrothermalis
Pathway
thyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P4S50_07290 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thyr03400
]
P4S50_07290 (uvrA)
DNA repair and recombination proteins [BR:
thyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P4S50_07290 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P4S50_07290 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
AAA_29
nSTAND3
nSTAND1
AAA_16
RsgA_GTPase
NTPase_1
AAA_22
AAA_25
NACHT
DUF87
AAA_18
AAA_15
ATPase
AAA_33
AAA_14
NB-ARC
PRK
T2SSE
SLFN-g3_helicase
RNA_helicase
Rad17
AAA_24
Cytidylate_kin
AAA_23
UTP20_N
Motif
Other DBs
NCBI-ProteinID:
WFD11872
LinkDB
All DBs
Position
1636909..1639383
Genome browser
AA seq
824 aa
AA seq
DB search
MFDYIEVKGANEHNLKNISINIPKYQLVAVTGPSGSGKSTFAFDILQRECQRQYMESMGM
VTDGMNKARVDSIAGLSPSISISQGINNRNPRSTVGTFTEVLTYLRLLYAKCGIRECPHC
QQLCYPIFDTEDIDDVGSNQKIIYCSRCKSSIPVLTMAHFSFNKSEGFCEQCSGIGEVNE
IDPMGIIDEHISVGQGAVQMWQGVMAQHYEKVLTKLAKHYQLEFDVKKSIKDYNDLEHLI
FFEGIKSENFKELYSHIDPPKKVSDGYFEGILTFLKKKSAENIRKGSSNKNIEKCFLRAI
CPVCHGTRLNEQARSVYVDNKSIIEVSSYTIDELKNWVLSLDKQLGYQNKEVLDSIVNDI
LRRIESISNIGLGYLTIDRTIQSLSGGEAQRLRMASLMDSGLTGVLYILDEPTTGLHPKD
TLKILEALKKLVEIGNTVMVIEHDMDFVSQCDYVIDFGPNSGSQGGQIVAYGKPEDISGF
ELSLTGKYLNKSYKAKLDISSRNFNEIHIVNAREHNLKNVNVSIPLNKFVTVTGVSGSGK
STLVFNILAGIYDGKKKDVDSVEGLHHVKHVIQVKQQRIGRSSRSTIATYTDIFTAIRTL
FSSQLSAKERCLKSSDFSFNVKGGRCEKCRGLGSIPLDMHFLDDIEVECPVCYGKRFNPH
VLEVMYKNYTISEILDMTVKQNMEIFSDQKEVLNRLSVLNEVGLGYLTLGQSTSTLSGGE
CQRIKLAKELGRAQGEHTLFLLDEPTTGLHPSDTEKLITLLNKLVYKGHSVIVIEHSMDV
ISQSDWIIDLGPEGGSKGGMIVAEGPPATIAATAESHTGRFLKI
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatatagaggtaaaaggagcaaatgaacataatttaaaaaatatttctatc
aatataccaaagtatcaactagttgcagttacaggtccatcgggttccggaaaatcaaca
tttgcttttgatattcttcaacgagagtgtcaaagacaatacatggaatcaatgggtatg
gtgaccgatggtatgaataaagcgagggttgatagtatcgctggtctatctccatctatt
agcatttctcaagggattaataataggaatccaagatcaacagtaggaacatttacggag
gtattgacgtatttaagacttctttatgctaagtgtggtataagggaatgccctcattgc
cagcagttatgttatcctatttttgatacagaagatattgatgacgttgggtcaaaccag
aaaataatttactgttctcgctgtaagagcagtattccagtgttgacaatggctcatttt
tcatttaataaatcagaaggtttttgtgaacagtgcagtgggattggtgaagttaatgaa
atagacccgatgggtattattgacgaacacatttctgttggacaaggtgcagttcagatg
tggcaaggtgtaatggctcaacactatgaaaaagtgcttacaaaattggctaagcattat
caattagaatttgatgttaagaaatctatcaaagattataatgatttggagcatttaata
ttctttgaaggtattaaaagtgagaattttaaagagttatattctcatatagatccaccc
aaaaaagttagtgatgggtattttgagggaattttaacatttttaaagaaaaagtctgct
gaaaatattagaaaaggatcgtcaaataaaaatattgaaaagtgtttcttaagagcgatt
tgtcctgtatgccatggaacaaggcttaatgaacaagcaagaagcgtatatgtagataat
aaatctattattgaggtttcatcctatacaatcgatgagttaaaaaattgggtgttatcc
cttgataaacaattaggttatcaaaacaaagaagtgttggattcaatagttaacgatatt
ttacgacgcattgagagcatatctaatattggtttggggtatttaacaattgatagaaca
attcaatcattatctggtggtgaggcacaaaggcttcgaatggcaagtttgatggactct
gggttgactggtgtattatacatattggatgaaccaacaacagggttacatccaaaagac
acattaaaaatactagaagcattaaaaaaattagtagaaataggcaatacagtgatggtt
attgaacatgatatggattttgtaagccagtgtgattatgttatcgactttggaccaaat
tcaggaagtcagggcggtcaaattgtggcatatggaaaacctgaggatatttcaggtttt
gagttatcattgacaggaaaatatttaaataagtcttataaagcaaaactagatattagt
agtcgtaattttaatgaaattcatattgttaatgcccgtgagcataatttaaagaatgtg
aatgttagtatacctcttaataagtttgttacagtaacgggtgtttctgggtcaggtaaa
tctacgcttgtatttaatatcttggcaggaatttatgatggaaagaaaaaggacgttgat
tcagttgaaggtctgcatcatgtaaagcatgtgattcaagtaaaacaacaaagaataggg
agatcttctcgatcaacaatagctacttacactgatatttttacagcaattcggacttta
ttttcaagtcaactatcagcaaaggaacgttgtttaaaaagtagtgacttttcattcaat
gtaaaaggtggtagatgtgaaaaatgtcgtggattagggtctatacctctagatatgcat
tttttagatgatattgaagtagaatgtccagtgtgctatggtaaaagatttaaccctcat
gtacttgaggtgatgtataaaaattacacgatttcggaaatacttgatatgaccgttaag
caaaatatggagatatttagtgatcagaaagaagtgttaaatcgcctaagtgtgcttaat
gaagtaggattaggctatcttacacttggacagtcaacttcaacactttcaggaggagaa
tgccaaagaattaaattagcaaaagagttgggtcgtgcacagggagaacatacacttttt
ttactagatgaaccgacaacaggattacaccctagtgatacagaaaaattaattacactt
ttaaacaaacttgtttacaaaggtcattcagtaattgttattgaacattctatggatgtg
atatcacaaagtgactggattattgatctaggaccagaaggcggatccaaaggcggaatg
attgtagcagaaggtccaccagcaacgattgctgcaacagctgagagtcatactggaaga
tttttaaaaatttag
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