Tepidibacter hydrothermalis: P4S50_09845
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Entry
P4S50_09845 CDS
T09528
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
thyr
Tepidibacter hydrothermalis
Brite
KEGG Orthology (KO) [BR:
thyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thyr03016
]
P4S50_09845
Enzymes [BR:
thyr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
P4S50_09845
Transfer RNA biogenesis [BR:
thyr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
P4S50_09845
Prokaryotic type
tRNA splicing ligases
P4S50_09845
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RtcB
SpoIISA_toxin
Botulinum_HA-17
Motif
Other DBs
NCBI-ProteinID:
WFD08702
UniProt:
A0ABY8E741
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All DBs
Position
2125471..2126595
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AA seq
374 aa
AA seq
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MIEIQGKYNTAKVFTHNIGQEAVGQILNVLNRKEWQDSTIRIMPDTHAGKGCTIGTTMTL
NNIVVPNLVGVDIGCGMTVAPLNQKTLDFNKLDNVIRNHVPAGTHIRKYNHEYVKLSKLK
KLKCIAHVDLERAKKSIGTLGGGNHFIEVNQDNGDNLYLVVHSGSRHIGNQVAKYYQDIA
IKNLSNNENYANRNITKTDKDLAFLTGEDFDNYLHDMNIIQEYASLNRKAIISVILKHLE
INDTKDIFETIHNYIDVNDMLLRKGAISAKKDEKVIIPINMRDGSIIAVGKGNEDWNQSA
PHGAGRLMSRGKAKESIDMNSYKDSMKNVWTTSVRESTIDEAPMAYKPIEEIIENTKDTI
DIIDIIRPLYNFKA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatacaaggaaaatataataccgcaaaagtttttacacacaatattggacaa
gaagccgttggtcaaatattgaatgttttaaatagaaaagaatggcaagacagcactatc
agaataatgcctgatactcatgcaggcaaaggctgtactataggtactactatgacatta
aataatattgttgtacctaacctagttggtgtagatataggatgtggtatgacggttgct
ccgttaaaccaaaagacattagattttaataaacttgataacgtaataagaaatcatgtt
ccagcaggtactcatataagaaaatataaccatgagtacgttaaattatcaaaacttaag
aagttaaagtgtatagctcatgtagatttagaaagagctaagaaaagcataggaacatta
ggtggaggaaaccactttattgaagttaaccaagacaatggcgataatttatatttggtt
gtacatagtggtagtaggcatataggtaatcaagtcgcaaaatattatcaagatattgct
ataaaaaatctttcaaacaatgaaaattatgcaaatagaaatattactaaaactgataaa
gatttagcatttttgacaggagaagattttgataactatcttcatgatatgaacataatt
caagagtatgcatctttaaatagaaaagctataatatcagttatcctaaagcacctagaa
ataaatgatactaaagatatttttgagacaattcataactatatagatgtaaatgatatg
cttcttagaaaaggcgctatatcagctaaaaaagatgaaaaagtaattatacctattaac
atgagagatggatctattattgctgtaggaaaaggaaatgaagattggaatcaatctgca
cctcatggagctggtaggttaatgagtcgaggtaaagctaaagaatctatagacatgaat
tcatataaagactctatgaagaatgtatggactacatcagttagagaatctactatagat
gaagctcctatggcatacaaacctatagaagaaataatagaaaatacaaaagatactata
gatattatagatataattagacctttatataattttaaagcttaa
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