Tepidibacter hydrothermalis: P4S50_10910
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Entry
P4S50_10910 CDS
T09528
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
thyr
Tepidibacter hydrothermalis
Pathway
thyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P4S50_10910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thyr03019
]
P4S50_10910
03009 Ribosome biogenesis [BR:
thyr03009
]
P4S50_10910
Enzymes [BR:
thyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P4S50_10910
Messenger RNA biogenesis [BR:
thyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P4S50_10910
Ribosome biogenesis [BR:
thyr03009
]
Prokaryotic type
rRNA helicases
P4S50_10910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Phage_integrase
DUF5659
Motif
Other DBs
NCBI-ProteinID:
WFD12365
LinkDB
All DBs
Position
complement(2324395..2325840)
Genome browser
AA seq
481 aa
AA seq
DB search
MMTLNFKDYNLSDEILKAIDRLNYTSPTEVQQKVIPIALKGRDVVVKSQTGSGKTASFAI
PICDKVDWEENKPQALVVTPTRELAIQVREEFFNIGRFKRLKVSEVYGQFSFRRQEKELK
QKTHIVVGTPGRLIDHMERGTIDLSMIKYLVIDEADEMLNMGFIEQIEAIIEKLPKNRIT
MLLSATIPKDIQNLCRSYMKDYEQIEIETQNLTVDKIDQERYSIDEEDKFEFLKDILVVE
NPDRCMIFCNTKKMVDELCDNLYPWMKSCSKIHGGMEQQDRSSVMNDFRKGKFRHLIATD
VAARGIDIDGITHVINYDTPEDKEDYVHRIGRTARASKSGKSITFVTENDMKFIDVIQKY
INKKIQPKEHPDKLTVDEGTDAFNEKNSTKLDMGPLKSEKVSEGIMKLHINAGKKTKMRP
VDIVGTLCNVDGMTAADIGIINIIDVSTFVEILNGKGEMVYNALQGRPIKGRVRRVSKCD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ataatgacattaaattttaaagattataacttgagcgatgaaatattaaaagctatagat
agattaaactatacatcacctactgaagttcaacaaaaagtaattccaatagcacttaaa
ggaagggatgttgtagttaaatctcaaacaggaagtggaaaaacagcatcatttgcaatc
cctatatgtgacaaggttgattgggaggagaataagccacaggctttagttgttactcca
acaagagagcttgcaattcaagtacgagaagagttttttaatataggtagatttaaaaga
cttaaggtatcagaagtatatggacagttctcatttagaagacaggaaaaagaacttaag
caaaaaacacatatagtagtaggaactccaggaagattgatagatcatatggaaagagga
actatagatttatctatgattaaatatttagtaatagatgaagcggatgaaatgttaaat
atgggattcatagaacagattgaagctataatagaaaaacttcctaaaaataggataact
atgctgctttctgcaactattcctaaggacatacaaaatctgtgtagatcatatatgaaa
gattacgagcaaatagaaattgaaactcaaaatttaactgttgataaaatagatcaagaa
agatactctatagacgaagaagataaatttgaatttttaaaggatattttggttgttgag
aatccagatagatgtatgatattttgtaatacaaaaaaaatggttgatgagctttgtgat
aatctatatccttggatgaagtcttgtagcaaaattcatggtggaatggaacaacaagat
agaagttcagttatgaatgactttaggaaaggtaaattcagacacttaatagctacagat
gttgcagctagaggtattgatatagatgggataactcatgttataaattatgatacacct
gaggataaggaagattatgttcatagaataggaagaactgctcgtgcaagtaaatcaggt
aagtctattacttttgtaacagaaaatgatatgaaatttatagatgttatacaaaagtat
ataaataagaaaatacaacctaaagaacatccagataagcttactgttgatgaaggtaca
gatgcttttaatgaaaaaaatagtacaaaattagatatgggtccattaaagagcgaaaaa
gtaagtgaaggaattatgaaacttcatataaacgcaggtaaaaaaactaagatgcgtcca
gttgatatagttggaactctttgtaatgtagatggaatgactgctgctgatataggtatt
ataaatataatagatgtttctacttttgtggagatattaaatggaaaaggagaaatggtt
tataatgctcttcagggtagacctattaagggaagggttagaagagttagtaagtgtgat
gaataa
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