Tepidibacter hydrothermalis: P4S50_16975
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Entry
P4S50_16975 CDS
T09528
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thyr
Tepidibacter hydrothermalis
Pathway
thyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P4S50_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thyr03400
]
P4S50_16975
Enzymes [BR:
thyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P4S50_16975
DNA repair and recombination proteins [BR:
thyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P4S50_16975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
HHH
NAT10_TcmA_helicase
AAA_22
HHH_2
T2SSE
SLFN-g3_helicase
AAA
ATPase_2
UvrD-helicase
nSTAND3
DEAD
AAA_28
DNA_pol_lambd_f
AAA_14
RsgA_GTPase
SRP54
NPHP3_N
Thymidylate_kin
AAA_16
AAA_29
ABC_tran
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WFD10047
UniProt:
A0ABY8EEY5
LinkDB
All DBs
Position
complement(3595371..3597593)
Genome browser
AA seq
740 aa
AA seq
DB search
MEKIKGMVVEIVFKNDDNGYTVAALEHSNDEVTIVGCMPTITVGETIELDGKWINHKMYG
PQFEVSSFIPCTPESEEGIYIYLSAGLIKGIGPKMARKIVDVFGLNTLDIIQMNPEKLTQ
VDGIGKKKAETIGKSFQDNRELRNLIISLSKYGITPNYCLKIYKKYKNKSIQIVETNPYK
LAEDIRGIGFKLADNIATKMGIDRHSKDRISQGIIYTLTQSLSEGHTYLPKSKLIKEASK
LLEINDEYIKDIVFKLALDQKIQIEKGPVEDNIYLIPYYISENGVCKKLIELSQYEFDDI
KLNIDKEISSIEKEDNITLANNQKEAVIQALQKGVMVVTGGPGTGKTTTINTIIKIFENL
KMNIYLSAPTGRAAKRMSETTGKEAKTIHRLLEMGYSSEDEEMVFMKSEDDQLDADVVII
DEVSMVDILLMYNLLKAIKPGTRVILVGDSDQLPSVGAGNVLKDIIDSNIIKVVKLDEIF
RQAKESMIVVNAHKINKGEKLDLNVKGKDFYFIPKYEKEDILKEIVNLAHKRLPDYYKID
NLKDIQILSPMRKGDTGVFNLNLCLQNVLNPNDKFKVEEKFQKRIFRVGDKVMQIKNNYT
KKWKNDDETKDGEGVYNGDIGYIYHIDKEEKIVYILFDEYKIAQYDYNELDEIDHSFCTT
IHKSQGSEFPVVIIPITWAPPMLLTRNLLYTAVTRAKELVVLVGDIKYLDYMVKNNKIYD
RYSNLNIKLSRFKDEGLLVE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaagggaatggtagttgaaattgtatttaaaaacgacgataatggatat
acagtagccgcccttgaacactcaaatgatgaagtcacaatagtaggatgtatgccgact
ataacagtaggtgagactattgaacttgatggaaagtggataaatcataagatgtatgga
cctcagtttgaagtgagttcatttattccctgtacacctgaatcggaggaaggaatatat
atatatttatccgctggacttataaaggggatagggcctaaaatggctagaaaaatagta
gatgtatttggacttaatacacttgatataatacaaatgaatcccgaaaaacttactcaa
gtagatgggataggaaagaaaaaggctgaaacaataggaaagagctttcaagataatagg
gaacttagaaacctaataataagtttatcaaagtatggaataactcctaactattgcctt
aaaatatataaaaaatataaaaataaatctattcagatagtagagacgaacccatataaa
ctagcagaagatataagaggaataggatttaagcttgctgataatatagcaactaaaatg
ggtatagatcgtcattcaaaagataggatatctcaaggtataatatatacactaactcaa
agtctaagtgaaggacatacttacttgcctaagagtaagcttataaaagaagcttctaaa
ctactcgaaataaacgatgaatacataaaagatattgtatttaagcttgcactcgatcaa
aaaattcaaatagaaaaaggccctgtagaagataatatatatttaattccatattatata
tctgagaacggagtttgtaagaaattaatagaactttctcaatatgaatttgatgatata
aaattaaatatagataaagaaatatcttcaatagaaaaagaagataatataactcttgca
aacaatcaaaaggaagctgtaatccaagcgttacaaaaaggagttatggtagtaacggga
ggacctggaactggaaagactactacaataaatactataataaaaatatttgagaattta
aaaatgaatatatatttatcagcaccaaccggaagagctgcaaagaggatgagtgaaaca
actggtaaagaagctaagacaatacatagattacttgaaatgggatattcatcagaagat
gaagaaatggtatttatgaagagcgaagatgatcaacttgatgcagatgttgttataata
gatgaggtgtctatggtagatattttacttatgtataacctacttaaagctataaagcct
ggaacaagagtgatattagttggtgattcagaccaacttccatcagttggagcgggaaat
gtattaaaagatataatagattctaatataataaaggttgtaaagcttgatgagatattt
agacaagcaaaagagagtatgatagtagttaatgcgcataaaataaataaaggcgaaaaa
ttagatcttaacgtaaaaggaaaagatttttactttattccaaagtatgaaaaagaagat
atattaaaagaaatagttaatttagctcataaaagacttccggattattataaaatagat
aatttaaaagatatacaaatattgtccccaatgagaaagggagatactggagtatttaat
ttaaatttatgccttcaaaatgttctgaatccaaatgataaatttaaggtggaagaaaaa
tttcaaaaaaggatatttagagtaggcgataaagtaatgcaaataaaaaataattataca
aagaaatggaaaaatgatgatgagacaaaagacggcgaaggtgtgtataatggagatata
ggatatatatatcatatagataaagaagaaaaaatagtatatatattatttgatgaatat
aaaattgcacaatatgactacaatgaacttgatgaaatagaccatagcttttgtactaca
atacataaaagtcaaggaagtgaatttcctgtagtgataatccctataacatgggcacct
ccaatgcttttaactagaaaccttttatatacagcagttacaagagctaaagaactagtt
gttttagttggagacattaaatatttagattatatggtgaagaacaataaaatatacgat
agatactcaaatcttaatattaagctttctagatttaaagacgaaggattgttagtagaa
tga
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