Thermotoga sp. Cell2: CELL2_02480
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Entry
CELL2_02480 CDS
T03495
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
thz
Thermotoga sp. Cell2
Pathway
thz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CELL2_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thz03021
]
CELL2_02480
03400 DNA repair and recombination proteins [BR:
thz03400
]
CELL2_02480
Enzymes [BR:
thz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CELL2_02480
Transcription machinery [BR:
thz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CELL2_02480
DNA repair and recombination proteins [BR:
thz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CELL2_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RnfC_N
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AIY87826
LinkDB
All DBs
Position
complement(457650..462722)
Genome browser
AA seq
1690 aa
AA seq
DB search
MPMSSFKRKIKAIQIKIASPEVIRSWSGGEVKKPETINYRTFKPERDGLFCERIFGPVKD
YECACGKYRGKKYEGTVCERCGVRVESREARRKRMGHIELAAPAVHIWYLESIPSVLGTL
LNMSTSDLENIIYYGSRRVIERAFIVTDPKDTPFSQGDVIYETEYRIYRKKWDFEVEQAF
VVKNPKSPVLSDIDGEVTLKTEKSITGREITWIIVKNITRATHTVLPGMILIVKDGQEVE
KGQDLTKEMTIDPVYAPFDGHVEIDELSNTITLKPLTTSKDQPVVFTAPYGAKILVSNGQ
KVKKGDQITTSTSLPSVKSSISGTVRFGSNLNIRALEDGNFEVLSTGEVYVEQVIEERKY
PVFEGALVYVNNGDQVKKGDHLADRFLFEEEYLSATEYKIFESHYPTMFDVEERTENDRP
IVVITDIDPEVSKETGLKVGDIVTENEYEAYLQIYPEKIVADAGAQAIKKLLQNLDLEAL
QAEIEAELKKLPSSSSKAIKLRRRLKMVKDFLKSGNKPEWMVLEVVPVIPPDLRPMIQIE
GGRFATTDLNELYRRLINRNNRLKKLLELGAPEIILRNEKRMLQEAVDALIHNGSDSEGK
RSRRAVLKDRNGRPLKSLTDLLKGKKGRFRRNLLGKRVDYSGRAVIVVGPHLKIHQCGIP
KKMAMELFKPFVLAKLLGEGSSSKTMRKVKKAIIEKEMPEAWEVLEEVIKGSVVLLNRAP
TLHRMSIQAFEPKLVEGNAIQLHPVVCPPFNADFDGDQMAVHVPLSAAAQAEARFLMLSR
YNIISPAHGKPISLPTQDIIIGSYYLTTVSKEFDSLREEDVKWKFSSPEEAMLAYHLGFI
KLHTPILIKVVINGEEKRIKTTLGRVIFNSILPEDLRDYNRIFDKKQINALVYETFKRHG
IDRAADLLDDIKDIGFHYATVSGLTLSLKDLKIPPERDEILRKTWEKVRIIEENYEKGFL
TEEQRKSEIIRLWMSVTEEITKLTSKTLAEDPFNPIYMMVNSGARGNIDQVKQLAGIRGL
MIKAYDPRSREIKSKIFKGQAIHEALTFDYPVDKNLREGVDILQFFISTYGARKGQVDTA
MNTSFAGYLTRRLVDVAQSVTVSEPDCGTHEGIRAMDLIKEGTVVEKMNEFLFGRVLARD
VLDPETKEVLKNPETGKEYTRNTMLTDDDANFLASYKKMVDVVRYEEIDITELSLPNMYA
EIAEPVGEYEEGTELTWDVVKAAKNEGKYRIKVKVYPVVGTVYAEEEPLYDKKGERQLLV
YQEVINEIVAKMLEENGIEKVPVRPDIIVRSPLTCESEYGVCAACYGMDLSNHKIVNVGE
SVGIVAAQSIGEPGTQLTMRTFHVGGVMGASDIVSGLTTVEKTFEPYAFLREEKSGGKKE
IRKYYGSEAILCEVDGFVKDIATDESGRTVIYIEDYAGNIHAYKVPKRAKVRVEKGQKVL
RGETLTSGAIVWWKLLELESEKGVMTAMNLLKIIKNAYVQQGVSIHDKHFEIIFKQMLSM
ATIIDPGDSDYLPDQLVPLVDIKRFNREILEGNAKVEENRKWVIGKTLAKRIITETEGGE
LVELAQKGDEVTEELLKKIIEAGIKEIDVFEKDKVVTYQILPKEPIKYKRRLLSLKKAAL
NYPGWLSAAAFEETAWVLTAAAIEGKVDPLIGLKENVIVGQLIPAGTGLDVFAGIQVEET
PRAAVEEELA
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgccaatgtcctctttcaagaggaagataaaggcgattcagataaagatagcctctcca
gaagtgataagaagctggtctggaggagaggtcaagaaacctgaaacgatcaactacaga
acgttcaaacccgagagagatggtcttttctgtgagaggattttcggtcctgtgaaggac
tacgaatgtgcctgtggtaagtataggggaaagaaatacgagggcaccgtctgtgagagg
tgtggagtcagggtcgaatccagagaagccaggagaaaaaggatggggcacatagaactg
gcagcacccgctgtgcacatctggtacctcgagagcataccgagtgtccttggaacactc
ttgaacatgagcacttcagacctggaaaacatcatctactacggcagccgccgtgtcata
gaaagggctttcattgtgactgatcccaaagatactccgttctcccagggggacgtgatc
tacgagaccgagtacaggatatacaggaaaaagtgggatttcgaagttgagcaggcgttc
gtggtgaagaatccaaaatctcctgttctttctgatattgatggagaagtgactttgaag
acagaaaagtccatcacaggaagggaaatcacctggatcatagtgaagaacatcaccaga
gccacacacacggtgctccctggaatgattctcattgtgaaagatggtcaggaagtggaa
aaaggacaggatctgacgaaagaaatgacaatcgaccctgtttacgctccgtttgacggt
cacgtggaaatagatgaactttcgaatactattacgttgaaacctctcacaaccagtaag
gatcagccggttgttttcacggctccttacggagcaaagattcttgtttcgaacggccag
aaggtgaaaaaaggtgatcagatcacgacttctaccagcctcccatccgtcaaatcgagc
atatctggtacagtgagatttggttccaacctcaacataagagcgcttgaagacggaaac
ttcgaagtgctctccaccggtgaagtctatgtagaacaggttatagaggagagaaaatat
cctgtctttgaaggagcgcttgtctacgttaacaacggcgaccaggtgaagaaaggggat
cacttagctgacagattcctcttcgaggaagagtatctctctgctaccgagtacaaaatc
ttcgagtctcactatccaaccatgttcgatgttgaagagagaacggaaaacgacagaccg
atcgtggtcataacggatatagatcccgaggtttccaaagagacaggcttgaaagttggc
gatatagtcacagaaaacgagtacgaagcgtatcttcagatatatccagaaaagatagtg
gctgatgccggagcgcaggcgataaagaaactgcttcagaatctggatctggaagcgctt
caggcggaaatcgaagcggaactcaaaaagttaccttcttccagctcgaaggcgataaag
ctcagaagaaggttgaagatggtgaaggatttcctgaaatctggcaacaaacccgaatgg
atggttcttgaggtcgttcccgtgattccacccgatctcaggccgatgatacagattgag
ggaggaaggttcgccacaacagatctcaacgaactttacagaagactcataaacagaaac
aacagactcaaaaaactcctggaactcggggcacctgagatcattctgagaaacgagaaa
agaatgcttcaggaagcggttgatgctctcattcacaacggctctgattcggagggaaag
agaagcagaagagccgttttgaaagacagaaacggcaggcctctgaaatcgctcaccgat
ctcctgaagggaaagaagggaaggttcagaagaaacctgcttggaaagcgtgtggactac
tctggaagagcggtcattgtcgtgggaccgcatctgaaaatacaccagtgcggtattcca
aagaaaatggcaatggagctcttcaaaccgtttgttctggcgaaacttcttggagagggt
tcttccagcaaaaccatgagaaaggtcaaaaaagcgatcatagaaaaagagatgccggaa
gcttgggaagtgctcgaagaagtgataaagggaagcgttgttcttttgaacagagctccc
acactccacagaatgtcaattcaggcgtttgaaccaaaactcgttgaaggaaacgccata
cagctccatcctgtcgtgtgtccaccattcaacgcggatttcgacggtgaccagatggcg
gttcatgtaccgctttcggccgcggcgcaggcagaggcaagatttctcatgctttcgaga
tacaacatcatctccccagcacacgggaagccgatttcgctgccgacgcaggatatcatc
ataggttcttactacctcacaacggtcagtaaagaattcgattcactgagagaagaagat
gtgaaatggaagttctcttcgcccgaagaggcgatgctggcttaccaccttggattcata
aaacttcacactccgattctgataaaggtcgttatcaacggcgaagaaaaacgaataaag
acgactctgggaagagtgatcttcaacagcattctcccggaagatttgagggattacaat
agaattttcgacaaaaaacagataaacgctctcgtctatgaaacgttcaagagacacggt
atagacagagctgcggatctcctggatgacataaaagacatcggtttccactacgcaacc
gtttccggtctgactctctcgttgaaagatctgaagataccaccagagagagatgagatt
ctcaggaagacctgggagaaggtcagaataatcgaagagaattacgaaaagggcttcctg
acggaggaacagagaaagagtgaaatcatacgactctggatgagtgtgacggaggagatc
acaaaactcacatccaaaacactcgcagaggatccgttcaaccccatatacatgatggtg
aactctggtgctagaggtaacatagatcaggtgaaacagctcgccggtatcagaggtttg
atgatcaaggcgtacgacccgcgatccagggaaataaagtccaagatcttcaaaggtcag
gcaatacacgaagcactcaccttcgattatccagtcgataagaacctcagagaaggtgtt
gacatcctgcagttcttcatatccacctacggtgctagaaagggacaggttgacacggca
atgaacacatcctttgcgggatatctgacgaggcgtcttgtggatgtagcccagagcgtc
acagtatcggaacccgactgtggaacacatgagggaatcagagccatggatctgataaaa
gaaggaacagtcgtggaaaagatgaacgagttcctcttcggtagagtgctcgcaagggac
gtgcttgatccagaaacaaaagaagttttaaagaatccagaaacgggcaaggaatacacg
agaaacaccatgctcacagacgacgatgcgaacttcctggcttcttacaagaaaatggtt
gacgttgtgagatacgaagagatagacataacagaactctcgcttcccaacatgtacgcc
gagatagcagaacccgttggagagtacgaagaaggaacggaactcacctgggatgtggta
aaagctgctaagaacgaagggaaataccgcataaaggtgaaggtctatcctgtcgttgga
accgtttacgcggaagaggaacctttgtacgataaaaaaggtgaaagacagcttctcgtg
taccaggaagtgataaacgagatcgtggcgaagatgctcgaagagaatggaatagaaaaa
gttcccgtgagacccgatatcattgtgagatcacctctcacctgtgagtctgagtacggc
gtctgcgctgcctgctacggtatggatctttccaaccacaagatagtgaacgtcggtgag
tctgtgggaatcgtagccgctcagtccataggagagcctggtacacagctcacaatgaga
acattccacgttggaggagtcatgggtgcgagcgacatcgtcagcggtctcacaactgtg
gagaagacgttcgaaccgtacgcgttcttgagagaagaaaagagcggtggaaagaaagaa
atcagaaaatactatggatccgaagccattctgtgtgaggtcgatggtttcgttaaagac
atagcaaccgatgaaagtggtagaacggtgatttacatcgaggattacgccggtaacatc
cacgcttacaaagtaccgaagagagcgaaagtaagggtagaaaaaggccagaaagtcctg
agaggagaaaccctcaccagcggtgccattgtgtggtggaaactcctggagctcgaatcg
gaaaaaggtgtaatgacggcgatgaatcttctgaagatcataaagaacgcctatgtccag
cagggcgtgagtatacacgacaaacacttcgagatcatattcaaacagatgctcagcatg
gcaacgatcatcgatccaggtgacagcgattatctaccggatcagcttgtaccgcttgtg
gatataaagagattcaacagggaaatcctcgaaggaaatgcgaaagtggaagagaacagg
aagtgggtcataggaaagacgctcgcaaagaggatcatcacggaaacagaagggggagaa
cttgtagaactcgctcaaaaaggcgatgaagtgactgaggaacttttgaagaagatcata
gaagcgggaataaaagagatcgacgtcttcgaaaaagataaagttgtgacgtaccagatt
ctcccgaaggaacctatcaagtacaagagaagactcctgtcgctcaaaaaagcagctctc
aactaccctggctggctcagtgcggctgcgtttgaagaaactgcgtgggtgttgaccgca
gcggcgatcgaaggaaaggtcgatccgctcattggattgaaggaaaacgtgatcgttggt
cagttgatacccgcaggaaccggtctcgatgtcttcgcgggaatccaggtggaagaaacc
ccaagggccgcggtggaagaagaactcgcgtga
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