Thiomicrorhabdus immobilis: THMIRHAM_00040
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Entry
THMIRHAM_00040 CDS
T08420
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
THMIRHAM_00040 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tib03400
]
THMIRHAM_00040 (recF)
DNA repair and recombination proteins [BR:
tib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
THMIRHAM_00040 (recF)
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Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_27
AAA_29
DUF2813
Nsp1_C
Motif
Other DBs
NCBI-ProteinID:
BCN92219
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Position
3703..4797
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AA seq
364 aa
AA seq
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MTQLTELSIQNFRNCASAQFEFSHGLNLIIGNNAAGKTAIIEAIWLLATGRSFRSQKSHH
LIQHNNSSATLFCQTQSSHNANDTHKIGVQKTLDNTLLRIDGETVKSHGPIAKLLPIQLL
TPESHKLLEEGPKARRQFMDWGCFHQSDVFMSAWRNYQRGLKQRNHALKKRLPKEQVQLW
DQTLVDSALKIDEIRQDYLEALTPYLVTFCQALMPEIESEVVCQYRAGWPKSNEDLLALY
QGNFTKDLQLGHTQYGAHRADIRFKFNNQEAMNILSRGQQKLFVCALLLAQASLHEKVVN
EPVIMLIDDLPAELDEIHRTKLLELLQILNIQHIITTTSEDLIPVLNPDTYQAWSIQTGK
ITAK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgacacagttaaccgaactcagcattcaaaactttcgtaattgtgcttcggctcaattt
gagtttagccatggcttgaatttgattattggcaataatgcagcaggtaaaaccgcgatt
atcgaggccatttggctactggctaccgggcgttctttccgttcacagaaatcgcatcac
ctgattcaacataacaactcttcagcgacactgttttgccaaacccaatccagtcataat
gcaaacgatacccacaagatcggtgtccaaaaaacattggataacaccctactgagaatt
gatggtgagaccgttaaatcacacgggccgattgccaaactattgcctatccaactgctc
acgccggaaagtcataaactattggaagaagggcctaaagcacgacgtcaatttatggac
tggggatgtttccaccagtctgacgtgtttatgagcgcatggcgtaattatcaacgtggt
ttaaagcaacgtaaccacgccttgaaaaaacgtctgcctaaagagcaagtgcaattgtgg
gatcaaaccctggtggatagcgccttaaaaatagatgagattcgtcaagactatttagag
gctctaaccccttatttggtgacgttttgccaagcgttaatgccagaaatcgaatctgag
gtggtttgccaatatcgtgctggctggcccaaaagtaatgaagatttattggctttgtat
caaggtaactttaccaaggacttgcagctaggccatacccaatacggtgcgcatcgtgcc
gatatccgctttaagttcaacaatcaagaagcgatgaatattttgtcacgcggccaacaa
aagttgtttgtctgtgcgctattattagctcaagccagtttgcatgaaaaggtggtgaac
gaaccggtgatcatgttgattgatgatttacctgcggagcttgatgaaattcaccgcacc
aaactgctggaactattacaaatcctaaatatccaacatattatcaccaccacttcagag
gatttgattcccgttctcaatcctgacacttaccaggcctggtcaattcaaactggcaaa
ataacagccaaataa
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