Thiomicrorhabdus immobilis: THMIRHAM_01210
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Entry
THMIRHAM_01210 CDS
T08420
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THMIRHAM_01210 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tib03400
]
THMIRHAM_01210 (xth)
Enzymes [BR:
tib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
THMIRHAM_01210 (xth)
DNA repair and recombination proteins [BR:
tib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
THMIRHAM_01210 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BCN92336
UniProt:
A0ABM7MAI3
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All DBs
Position
complement(160558..161379)
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AA seq
273 aa
AA seq
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MKIVSFNTNSVRLRLHQLQALTDQIAPDIIGLQETKVQDHEFPIDEIHAMGYNAIYMGQK
THYGVALLYRNGIELIDSQKGWKSDTEDAQKRMIIGDFAFENSEVVRVINGYFPQGENRE
HPVKFPAKEKFYQDLMDYLNSDCDPKQQLAVIGDFNISPTDLDIGIGEPNRKRWLRDGKT
SFLPEEREWWQRLLDWGLIDTFRTIHPETNDVFSWFDYRSKGFDREPRRGLRIDTVLATA
TLNEKATKSEVSYNVRGMEKPSDHAPVWTEFKF
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgtatctttcaataccaatagcgttcgtttacgtttacatcaacttcaagcc
ttaaccgaccaaattgcacctgatattatcggccttcaagaaaccaaagtacaagaccat
gagtttccaatcgatgagattcatgcaatgggatacaacgcgatttatatggggcaaaaa
acacactacggtgtggcattgctgtatcgcaatgggattgagctgattgattcacagaaa
ggttggaagagcgataccgaagatgcccaaaaacgcatgatcattggagattttgctttt
gaaaatagtgaagtcgttagagtgatcaatggctatttccctcagggtgaaaaccgcgaa
catccggttaaattccctgctaaagagaagttttatcaagatttaatggactatttgaat
agcgattgcgaccccaagcaacaacttgccgtgattggtgattttaatatctctccaacc
gatttggatatcgggattggtgaacctaatcgcaaacgctggttgcgtgatggaaaaacc
agctttttgccagaagagagagagtggtggcaacgccttttggactgggggttgattgac
accttcagaaccattcatccagaaaccaatgatgtctttagctggtttgattaccgctcc
aaaggattcgaccgtgaaccgcgacgaggtctgcgtatcgataccgtgttagcgacagcc
acactcaatgaaaaagccactaaaagtgaagtcagttataacgtaagaggtatggaaaag
ccctctgaccatgctcctgtttggaccgaatttaaattttaa
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