Thiomicrorhabdus immobilis: THMIRHAM_03000
Help
Entry
THMIRHAM_03000 CDS
T08420
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tib03000
]
THMIRHAM_03000
Transcription factors [BR:
tib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THMIRHAM_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
MarR_2
HTH_23
HTH_AsnC-type
HTH_20
HTH_5
MarR
PBP_like
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCN92515
LinkDB
All DBs
Position
376593..377519
Genome browser
AA seq
308 aa
AA seq
DB search
MHNLNVTAQQIRIFEAVARNQSYTKAAEELHLSQPAVSIQVKRLEENNDVKLIEVVGKKL
FLTRPGERMFKSCQKILEELQDLNAHIKSDQARVDGELKIAVVTPAKYFMPYILKAFLNR
FPDVKPVITVINRRRILDELKQNQYDLSIMGRVPENLNMEAFAFFQNELVVAAPPKHHLS
KEKKIPIQDIANERFLMREKGSGIRDSVMDRFEENGIHVEPYMELGSTESIKQAVMAGLG
ISVLPKQAIRLETRYRHIDVLDVEGFPVTRDWYVAKMTGKALTPASEAFLDFLKNVDINK
LLVMSDTR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcataatttaaacgttacagcccagcaaatacgcatctttgaagcggttgctagaaat
caaagttacacaaaagcagctgaagaattacatctttcacagccggcagtttctattcaa
gttaagcgtcttgaagagaataatgatgtgaaattaattgaagttgtcggtaaaaaattg
tttttgacccggcctggtgaacgtatgttcaagagttgccagaagattttagaagagctt
caagacttaaacgcacatattaaatctgatcaggccagagtggatggcgagcttaagata
gcggtggtgactccggctaaatattttatgccttatatattgaaagcgttcttaaaccgt
ttccctgatgtcaaaccggttatcacggttatcaatcgccgtcgtatcttggatgaacta
aagcaaaaccaatatgatttgtcgatcatggggcgagtgcctgaaaatttgaatatggag
gcgtttgcattttttcaaaatgaattagtggtcgcggcaccgccaaagcatcatttatca
aaagagaagaagatacctattcaagatattgccaatgagcgctttttaatgcgagaaaaa
ggttcgggtattcgtgattcagtcatggataggtttgaagagaatggtatccatgtcgag
ccatatatggagttgggaagtactgaaagtatcaaacaagcggttatggcaggcctgggt
atctctgttttgccgaaacaagccattcgattggaaacacgttatagacatatagatgtg
ttggatgttgaagggtttccagttacccgtgattggtatgtcgccaagatgactggtaag
gcattgactccggcttctgaagctttcctggattttctaaagaatgtcgatatcaataaa
ctcttggttatgtccgatacccgttaa
DBGET
integrated database retrieval system
