Thiomicrorhabdus immobilis: THMIRHAM_06110
Help
Entry
THMIRHAM_06110 CDS
T08420
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THMIRHAM_06110 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tib01007
]
THMIRHAM_06110 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tib03016
]
THMIRHAM_06110 (valS)
Enzymes [BR:
tib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
THMIRHAM_06110 (valS)
Amino acid related enzymes [BR:
tib01007
]
Aminoacyl-tRNA synthetase
Class I (U)
THMIRHAM_06110 (valS)
Transfer RNA biogenesis [BR:
tib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
THMIRHAM_06110 (valS)
Prokaryotic type
THMIRHAM_06110 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
HTH_Cmi2_C
KIF21A_4th
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BCN92826
UniProt:
A0ABN6CV16
LinkDB
All DBs
Position
complement(706726..709494)
Genome browser
AA seq
922 aa
AA seq
DB search
MEKHFDPNTIETKWYQTWENQGYFKPQKPDADPYSIMIPPPNVTGSLHMGHAFQDTIMDT
LIRYNRMKGNDTLWQPGTDHAGIATQMVVERQLAAKGLTRHDLGREKFIEKIWEWKEESG
GTITKQLRRMGASPDWSRERFTMDDGLSDAVKEVFVKLYEEDLIYRGKRLVNWDPILHTA
VSDLEVISEEEQGNLWHMRYPLTDGSGYLVVATTRPETMLGDQAVAVHPDDERYQHLIGK
TITLPLVGREIPIIADDYVDLEFGTGCVKITPAHDFNDYEMGKRHNLPMLNIFTIDAAIN
EEAPEKYQGLDRYEARKQIVADLDALGLIEDIKPHTLMVPRGDRSHAVIEPFLTDQWYVA
VAELAKPAIDAVKNGDIEFVPKNWENTYFEWMNNIQDWCISRQIWWGHRIPAWYDNQGKV
YVGRDEAEVRAKHNLAADIELNQDNDVLDTWFSSALWTFSTLGWPEKTPELEKFHPTSVL
VTGFDIIFFWVARMIMMGLKFTGEVPFKQIYVHGLVRDGEGQKMSKSKGNVLDPIDLIDG
IELEDLVKKRTYGMMQPEKAAQIEKATRKQFSDGIPAFGTDALRFTFASLASTGRDIRFD
LNRAEGYRNFCNKLWNATRYVLMNTEGYDTGVDESLEVEYSLADRWITSRLQEVEAEVAK
HFASYRFDLAATALYEFTWNEYCDWYLELAKPILNKDSSDAAKRGTRKTLVRVLEALLRL
LHPIIPFITEEAWQAVAPLAGKHGNTIMLEPYPEADESKIDTNAVAELEWVKQFIVGVRK
IRSEMDIAPSKALEVLLAGLNENDQAWLDNNQVFLQTLAKLESITVLQNEADAPESAVAL
VGEMKVLIPMAGLIDKDAELARLGKEIAKLQGEIKRLSGKLNNAGFVAKAPEEVVANERK
KLSDYETALNNLEAQHDKIQQL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcatttcgaccccaatacaatcgagacaaagtggtatcaaacctgggaaaac
caaggatatttcaaaccacagaaacctgacgcagacccttacagcatcatgattccgccg
cccaatgtgacgggtagcctgcatatggggcatgcattccaagacaccattatggatact
ttaatccgctacaaccgcatgaaaggcaatgacaccctttggcaaccaggtaccgaccac
gctggaatcgccacacaaatggtggtagagcgtcaacttgcagcaaaaggtttaacccgc
cacgatttggggcgagagaagttcattgagaaaatctgggaatggaaagaagagtccggt
ggtaccatcaccaagcaacttcgccgcatgggagcgtcaccggactggagtcgtgaacgt
ttcactatggatgacggcttatctgacgcggtgaaagaagtctttgtaaaactctatgaa
gaagatttgatttaccgcggaaaacgcctagtaaactgggatcctatcctgcacacagcg
gtttcggatttagaagttatctctgaagaagagcaaggcaacctatggcacatgcgttac
ccgctaacggacggttctggatatttagtagtggcgaccacccgcccagaaaccatgctg
ggtgaccaagccgttgcggttcatccagacgacgaacgctaccaacacctcatcggtaaa
accatcactctgccattggttggccgtgaaattccgattatcgccgacgattacgtagat
ttagaatttggaacgggttgtgtaaaaatcactcctgctcacgattttaacgactacgag
atgggcaaacgtcacaacttaccgatgttgaatatcttcacgattgatgccgccatcaat
gaagaggctccagaaaaataccaaggtttagaccgttacgaagcacgtaagcaaatcgtg
gcggatttggatgccttaggcctgattgaagatatcaaaccgcacaccttgatggtgcca
cgtggtgaccgctctcatgctgtcattgaaccattcttgacggaccagtggtatgttgcg
gttgcagaattggctaaacctgcgattgatgcggtcaaaaacggcgacatcgaatttgta
cctaaaaattgggaaaacacctattttgaatggatgaataatatccaagactggtgtatt
tctcgccaaatctggtggggacaccgtattccagcctggtatgacaaccaaggcaaggtt
tatgttggccgtgatgaagccgaagtgcgcgctaaacataacttggctgccgacattgaa
ctaaaccaggataacgatgtgttagatacctggttcagctcggctttatggacattctct
acattaggctggccagagaagactccggaactggagaagttccaccctacttcggtattg
gttaccggttttgacatcatcttcttctgggtagctcgtatgatcatgatgggcttgaag
ttcactggtgaagtgccgttcaagcagatttacgtgcacggtttagttcgtgatggcgaa
ggccaaaaaatgtctaaatcaaaaggcaacgtacttgaccctatcgacctaattgacggt
attgagcttgaagacctggttaagaaacgtacctacggcatgatgcagccagaaaaagcc
gcacaaattgaaaaagcgactcgcaaacaattttccgatggcattccagcctttggaaca
gatgctttacgcttcactttcgcttctctggcttcgactggacgtgacattcgtttcgac
ttgaaccgtgccgaaggttaccgcaacttctgtaacaaattatggaacgccacccgttat
gtattgatgaatacagaaggttacgacacgggtgtggacgaatctttagaagttgagtac
tcccttgcagaccgttggattacttcacgtctacaagaagtggaagccgaagttgcaaaa
cactttgccagctaccgttttgacttagccgcaaccgcactgtatgaattcacctggaac
gaatattgtgactggtatttagagttggctaagccaattctaaacaaagacagttctgac
gcagcaaaacgcggtacccgtaaaacattggttcgagtattggaagcgttattgcgtttg
ctacacccaatcattccattcattactgaagaagcgtggcaagcggtcgcacctttagcc
ggcaagcatggcaataccattatgcttgagccttaccctgaagcggacgaaagtaaaatt
gacacgaatgccgtagctgaactggaatgggttaaacagtttattgtcggtgtgcgtaag
atccgctctgaaatggacattgcaccaagtaaagcccttgaggttttattggccggcttg
aatgaaaacgaccaggcctggttagacaacaaccaagtgttcctacagactttagccaaa
ctcgaaagcatcaccgttttacaaaacgaagcggatgctcctgaatccgctgtggcttta
gtaggtgaaatgaaggtgttgattcctatggccgggctaatcgataaagatgccgaattg
gcgcgtttaggtaaagaaattgcaaaactgcaaggcgaaatcaaacgtttaagcggcaag
ctaaacaatgctgggtttgttgccaaggcacccgaagaggtggtggcaaatgaacgcaaa
aaactaagcgactacgaaaccgctcttaacaaccttgaggctcaacatgacaaaattcag
caactttaa
DBGET
integrated database retrieval system
