Thiomicrorhabdus immobilis: THMIRHAM_08160
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Entry
THMIRHAM_08160 CDS
T08420
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00260
Glycine, serine and threonine metabolism
tib00630
Glyoxylate and dicarboxylate metabolism
tib00670
One carbon pool by folate
tib00785
Lipoic acid metabolism
tib01100
Metabolic pathways
tib01110
Biosynthesis of secondary metabolites
tib01200
Carbon metabolism
Module
tib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
THMIRHAM_08160 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THMIRHAM_08160 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
THMIRHAM_08160 (gcvP)
00670 One carbon pool by folate
THMIRHAM_08160 (gcvP)
Enzymes [BR:
tib01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
THMIRHAM_08160 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
SepSecS
Motif
Other DBs
NCBI-ProteinID:
BCN93031
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All DBs
Position
928592..931525
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AA seq
977 aa
AA seq
DB search
MSQTTLSQLAQCSLSDLQQSETFVKRHLGPDSAEQLAMLQTLGMASITELIDKVVPGSIR
RQQAMDLPDGLTEHQSLAKLKSLAQQNQVLKSFIGMGYYNTLTPPTIQRNILENPAWYTA
YTPYQAEISQGRLEAMLNFQTMVADLTGLELANASMLDEATACAEAMTLCQRMSKAKGKV
FFVAEDCHPQNIEVVKTRAEPLGIDVVVGNPAEGLDNLDLFGMLLQYPGTYGEVADLTPL
IEAAHAKKALVAVAADLLALTLLKPPGEMGADVVVGNTQRFGVPLGYGGPHAAYMATRDS
FKRSMPGRLIGVSLDSRGKKAYRLALQTREQHIRRERATSNICTAQALLAVMASMYAVYH
GAQGLVKIAYRVHRFTQTFAKGLSRLGITVNNSVYFDTLRIHVPGRAVKIAEKAVLQGYN
LRPIDVDNIGFSFDEATTVDDIKTLWTVFADDAANSLDAESVLEGQADIIPSQLQRTSAF
LTHPVFHEHRSETEMMRYMRHLADKDLALDRAMIPLGSCTMKLNATAELMPISWPEFANM
HPFSPLEQAQGYQKMVKELEKMLCETTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGET
HRDICLIPASAHGTNPASAQMAGMDVVVVNTTAEGEIDLDDLQAKLDKYSQQLAAIMITY
PSTHGVFEENVKTVCEMVHQHGGQVYIDGANMNAMVGIAAPGKFGGDVSHLNLHKTFAIP
HGGGGPGVGPIGVGKHLAPFLPGYAVVQAEDEPNEVGAVCGAPWGSAGVLPISWSYIAMM
GRDGLQQATSVAILNANYIAQRLAPHYPILYSDKNGLVAHECIIDLRPIKEQSGISVDDI
AKRLIDYGFHAPTMSFPVAGTLMIEPTESESKLELDRFCDAMIAIKQEIVDVMNGALDEN
DNPLKNAPHTAEMVMNDEWSHSYSRALAAYPLASLRESKYWCPVGRVDNVYGDRNLVCSC
PPLSDYAHDEDALQGEA
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaccactttatctcaacttgcacaatgttcgctcagcgacttgcaacagagt
gaaacctttgtaaaacgccatttaggtccagacagcgccgaacagctagcgatgttacag
accctcggaatggcttcgattacagagctgattgataaagtggtgcccggttccattcgc
cgtcaacaagccatggatttgccagatggtctgaccgaacaccaatctctggccaaactc
aaatcgctcgcccagcaaaatcaagttctcaaatcctttattggaatgggttactacaac
accttaaccccgccaaccattcaacgtaatattctcgaaaaccccgcttggtataccgcc
tatacaccttatcaggctgaaatctcacaggggcgcctagaggccatgctcaactttcaa
accatggtggcagacttaaccggtttagagttggccaatgcctcgatgttggatgaagcc
acggcctgtgccgaggccatgaccttatgtcaacgtatgagtaaagccaaaggtaaggtg
ttttttgtggccgaggattgtcacccgcaaaacattgaagtggtgaaaacccgcgctgaa
ccattgggcatagacgtggtggtgggaaatccagctgagggtttagacaacttggatttg
tttgggatgttactgcaatatcctggaacttacggtgaagtggccgatttaactccgttg
atagaggcggcgcacgcgaaaaaagccttggtggcggtagctgcagatttattggctttg
acactattgaaaccacctggggagatgggggcggatgtggtggtcggcaatacccaacga
tttggcgtgcccttaggttacggcggaccacatgctgcttatatggctactcgagacagc
tttaaacgttctatgccagggcgtttaatcggggtctctttagatagtcgaggtaaaaaa
gcttaccgtttggccttgcagacccgcgagcaacatattcgtcgcgaaagagccaccagt
aatatctgtaccgctcaggcgttattggcggtcatggcgagtatgtatgcggtttatcat
ggagcacaaggcttggttaaaatcgcctaccgggtgcatcgctttacccagacctttgcc
aaaggtttaagtcggttagggataactgttaataacagcgtttatttcgataccttacgt
attcatgtgccgggaagagcggtgaaaattgccgaaaaagcggtgttacaaggctataac
ctcaggccgattgatgtcgacaatatcgggttctctttcgatgaagccactacggtggat
gacattaaaacgttatggacggtgtttgccgatgatgcggcaaactcactcgatgccgag
agtgtactggaggggcaagcggacatcattcctagccaattacagagaacctccgcgttt
ttaacccacccggtgtttcatgagcaccgttcagaaactgagatgatgcgttatatgcgt
catttggcggataaagatttggccttggacagggcgatgattccattggggtcttgcact
atgaaattgaatgcaacagccgaattgatgccgatttcctggccggaatttgcgaatatg
cacccattttcgcctttagaacaggcgcaaggttaccaaaaaatggtcaaagaactcgag
aaaatgctctgcgaaaccaccggttatgatgcggtatctttgcaacctaactccggggcg
cagggggagtatgccgggctattggcgattcgtgcctatcatcgaagtcggggtgaaacc
catcgtgatatctgtttaatccccgcttcggctcatggtaccaatccggcctcggcacaa
atggcgggtatggatgtagtggtggtcaataccacggccgagggcgaaatcgatctggat
gacctacaagccaaattggacaaatactcacaacaacttgcggccattatgattacctat
ccctctacccatggggtgtttgaagagaatgtgaagaccgtttgcgaaatggtccatcaa
cacggtggtcaagtctatattgatggtgccaatatgaatgccatggtcggtattgccgcg
ccaggaaaatttggaggtgatgtctcacatttgaatttgcataaaaccttcgcgataccg
catggcggaggcgggccgggtgtagggccgataggtgtgggcaaacatttagcgccgttt
ttaccgggttatgccgtggtgcaggcggaggatgagcctaatgaagtaggcgccgtttgc
ggcgcgccgtggggcagtgcgggagtgttaccgattagttggagttacattgccatgatg
gggcgtgatggtttacagcaagccacatcggttgccattcttaacgcgaactacatcgcc
cagcgtttagcgccacattaccctattttgtatagcgataaaaacggtctagtggcacac
gagtgtattatcgatttgcgtccaattaaggagcaatcgggtatctcggtggacgatatc
gccaaacgtttgattgattacggcttccatgcacctaccatgtcatttccggttgcaggt
accctgatgatagaaccgaccgaatcggaatccaagctggaattggatcgtttttgcgat
gcgatgattgccatcaaacaagagattgtcgatgtcatgaatggtgcgctggatgagaat
gataatccgcttaaaaacgcaccgcacactgccgagatggtgatgaatgatgaatggtca
catagttattcccgagcgttggcggcttatccgttggcaagcttgcgtgagagcaaatat
tggtgtccggtagggcgagtggataatgtctatggtgaccgcaatttggtctgctcctgt
ccgcctttgagcgattacgctcacgacgaagatgccttgcaaggagaagcctaa
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