Thiomicrorhabdus immobilis: THMIRHAM_08180
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Entry
THMIRHAM_08180 CDS
T08420
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THMIRHAM_08180 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tib01007
]
THMIRHAM_08180 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tib03016
]
THMIRHAM_08180 (serS)
Enzymes [BR:
tib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
THMIRHAM_08180 (serS)
Amino acid related enzymes [BR:
tib01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
THMIRHAM_08180 (serS)
Transfer RNA biogenesis [BR:
tib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
THMIRHAM_08180 (serS)
Prokaryotic type
THMIRHAM_08180 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CEP63
FKBP15
Prefoldin_2
BAR_4
NET2A_C
CCPG1_N
NET2A
CCDC160
Wtap
HmpF
KIF21A_2nd
DUF3450
Sec2p
Plectin_PPL
BLOC1_2
tRNA-synt_His
DUF2981
CLIP1
CEP83_CC_1st
CCDC144C
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
BCN93033
UniProt:
A0ABM7MCD9
LinkDB
All DBs
Position
932214..933500
Genome browser
AA seq
428 aa
AA seq
DB search
MLDAKLLRSDLETVAQKLKTRGYELDTAQIQALEAQRKELQTKAQDLQAERNSRSKGIGK
AKAQGEDIAPLLAEVENLKTQLEEAEKASEAVQAEIETIYAGIPNLPHESVPIGSSEDDN
IEIRKWGEPRTFDFDVKDHVELSEQRGWYDNDAAVKVTSGRFSVLKGPMAKMQRALIQLM
LDTHSENGYEEVYVPYLVNQDSLRGTGQLPKFEADLYKISKNDEHDTNDRDLYLIPTAEV
PITNLVRDEILDEADLPLKMAGHTPCFRSEAGSYGRDTRGLIRQHQFEKVEMVQIVHPEQ
SHQALEDLTGHAEAILQKLGLPYRVVTLCTGDIGFSAAKTYDLEVWLPGQSAYREISSCS
NFEDFQARRLMARFRSKEGKPQLVHTLNGSGLAVGRTLVAVLENYQNADGTITVPEALRP
YLGGVEVL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagacgcaaagctactgagatcagacttagaaacggttgcccaaaaattaaaaaca
cgcggttatgaattggacaccgcacaaatccaagctttagaagctcagcgtaaagagtta
cagactaaggcccaagatttacaggcagaacgtaatagccgctcaaaaggcattggtaaa
gcaaaagcgcaaggtgaagatattgcaccgttgctggctgaagtggaaaacctgaaaacc
caattagaagaagctgaaaaagcctcggaagcggtgcaggctgaaattgaaaccatctat
gcgggaatcccaaacctaccgcatgaatcggtgccgattggttcaagtgaagacgataac
attgaaatccgtaaatggggtgagccaagaacctttgattttgacgttaaagatcatgtg
gaactttctgaacagcgtggctggtatgataatgatgcggcggttaaggtgacttctggt
cgtttctcggtattgaaagggccaatggccaaaatgcaacgcgcgttgattcaattaatg
ttggacacacattctgaaaacggctatgaagaggtctatgtgccttacttggttaaccaa
gacagcttacgcggtaccggtcagctacctaagtttgaagcggatttatataaaatcagc
aaaaacgatgaacacgataccaacgaccgtgatttatatcttatcccgacagccgaagtg
ccgattaccaacttggttcgtgatgaaattcttgatgaagccgatctaccgttgaagatg
gctggccatacgccttgtttccgttcagaagccggttcatacgggcgtgatactcgaggt
ttgattcgtcagcatcagtttgaaaaagttgaaatggtgcaaatcgttcacccagagcaa
tcacatcaagcccttgaagacttaaccggacatgcggaagccattctacaaaagctggga
ttgccttatcgtgtggtgaccttatgcactggtgatattggtttctccgcggcaaaaacc
tatgacttagaagtttggttacctggacagtcggcttatcgtgaaatttcatcgtgttct
aactttgaagatttccaagcgcgtcgattgatggctcgtttccgctctaaagaaggcaaa
ccacaactggtacataccttgaatggttcaggtctagcggtagggcgcactttggttgcg
gtgttggaaaattaccaaaatgccgacggaacaatcaccgtacctgaagcattgcgtcct
tacctgggcggtgtagaagtgctgtag
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