Thiomicrorhabdus immobilis: THMIRHAM_08300
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Entry
THMIRHAM_08300 CDS
T08420
Symbol
rluA
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tib03009
]
THMIRHAM_08300 (rluA)
03016 Transfer RNA biogenesis [BR:
tib03016
]
THMIRHAM_08300 (rluA)
Enzymes [BR:
tib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
THMIRHAM_08300 (rluA)
5.4.99.29 23S rRNA pseudouridine746 synthase
THMIRHAM_08300 (rluA)
Ribosome biogenesis [BR:
tib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THMIRHAM_08300 (rluA)
Transfer RNA biogenesis [BR:
tib03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAM_08300 (rluA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BCN93045
LinkDB
All DBs
Position
complement(950501..951157)
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AA seq
218 aa
AA seq
DB search
MHPLPMTQFQFDSNWIIYADAHLIVANKPSGLLSVPGRGPDKQECLLSHLMTDFPDAKIV
HRLDMDTSGLMVVARSAEVHRHLSRQFQERQTKKRYYAVCAGKPSLESGYINLPMRCDWE
RRPLQMIDFKQGKGALTHWKVLEQYVDSFLVELSPVTGRSHQLRLHMKSLGHPILGDNLY
ADSDSLRQSNRLMLHAKFLSFIHPITNQSLTFDCPADF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttgcccatgacccaatttcaatttgattccaactggattatctacgcggac
gcacatttaattgtggccaataaacccagcgggctactttccgtacctggccgcggccct
gacaaacaagaatgtttgctatcccatctaatgaccgattttcccgatgcaaaaatcgtg
caccgtctggacatggacacctctggcttaatggtcgtcgcacgttctgctgaagtccac
cgccaccttagccgccaattccaggagcgccaaaccaagaagcgttactatgcggtctgt
gccggtaaacctagccttgaaagcggttatataaacttgcctatgcgttgcgactgggaa
cgtcgaccgttacaaatgattgacttcaaacaaggtaaaggcgctttaacgcattggaaa
gtgcttgaacaatacgtggattcttttttagtagaactctcgcccgtcaccggtcgttcg
catcaactcagattacatatgaaatcacttggccaccctattttaggagacaacctttat
gcggattccgatagtttacgccaatccaatcgattgatgttgcacgctaaattcttaagt
tttatacaccctatcaccaaccaatcactaacatttgattgccctgctgacttttaa
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