Thiomicrorhabdus immobilis: THMIRHAM_10730
Help
Entry
THMIRHAM_10730 CDS
T08420
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tib03016
]
THMIRHAM_10730 (truB)
Enzymes [BR:
tib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
THMIRHAM_10730 (truB)
Transfer RNA biogenesis [BR:
tib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAM_10730 (truB)
Prokaryotic type
THMIRHAM_10730 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BCN93288
LinkDB
All DBs
Position
1205335..1206246
Genome browser
AA seq
303 aa
AA seq
DB search
MSQFRRPPKRVVNGIVLLNKPAGVSSNGILQQVIRVFNAKKGGHTGALDPFATGLLPICL
GEATKVSGLLLDSDKRYTATLKLGEQSDTGDTEGEIIQTLPVPELSEALIEKVFAQFIGD
IQQVPPMYSALKHQGKPLYFYARQGIEIERPARPIRILNLSLVSFTQNQIIFDVHSSKGT
YVRTLGEDIAKALGTVGHLTALHRTQTGSLKGDEMLSLEEIETQLDNCLHPIDEAIQHLQ
RFDLTAEQADLIRHGGKLDFAKPETDLVRFYENDICIAVGEWQADKQLLKPKRVFNLPES
VAG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtttcgtcgtccaccaaaacgtgtggtaaatggtattgttttgcttaataag
cctgcaggcgtgtcatccaatggtatcttgcaacaggtaattcgggtctttaatgcaaaa
aaaggtggccatactggcgccttagatccttttgcaaccggcttgttgcctatttgtttg
ggtgaagcgactaaggtctcaggtctattgctcgattcagataagcgttatacggcaacc
ctgaagttaggtgaacagtcggataccggtgatacggaaggtgaaatcattcaaacctta
cccgtacctgaactttctgaagcgttgattgaaaaagtgttcgcccagtttatcggtgat
atacaacaggttccacctatgtattcggcacttaaacatcaaggtaaaccgttgtatttt
tatgctcgtcaagggatagaaatcgagcgtccagcacgcccgatacgaattctgaacctg
tcgttggtctcgtttacccaaaatcaaataatctttgatgtgcatagttccaaagggact
tatgtcagaacgttaggtgaagacatcgctaaggccttgggaacggttgggcatttaacg
gcactgcatcgtacccaaacggggagtttaaaaggtgacgagatgttgagtctggaagag
attgaaactcagctcgataactgtctacacccgatagatgaagcgattcagcatctacag
cgttttgatttgacggctgagcaggccgatttaattcgtcatggcggcaagttggatttt
gccaaaccggaaaccgacctggttcgtttttatgagaacgacatctgtatcgccgttgga
gaatggcaggctgataaacagctattaaagcccaagcgagtgtttaatttacctgaaagt
gtggcaggctga
DBGET
integrated database retrieval system
