Thiomicrorhabdus immobilis: THMIRHAM_11130
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Entry
THMIRHAM_11130 CDS
T08420
Symbol
hup
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tib03032
]
THMIRHAM_11130 (hup)
03036 Chromosome and associated proteins [BR:
tib03036
]
THMIRHAM_11130 (hup)
03400 DNA repair and recombination proteins [BR:
tib03400
]
THMIRHAM_11130 (hup)
DNA replication proteins [BR:
tib03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
THMIRHAM_11130 (hup)
Chromosome and associated proteins [BR:
tib03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
THMIRHAM_11130 (hup)
DNA repair and recombination proteins [BR:
tib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
THMIRHAM_11130 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BCN93328
LinkDB
All DBs
Position
1260190..1260462
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AA seq
90 aa
AA seq
DB search
MNKSELVSAIAEEAGLTKADAAKALDATVASITKAMSSGDSVAIIGFGTFKVGERSARTG
RNPQTGAEMQIPAAKVPKFTAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgaattagtaagtgcaatcgcagaagaagctggtttaacaaaggcagat
gcagctaaagcattagatgcaacagtagcttctattactaaagcaatgagctcaggtgat
tctgttgctattatcggttttggtactttcaaagttggtgagcgttctgcacgtactggt
cgtaacccacaaactggtgctgaaatgcaaattcctgcagctaaagttcctaagtttact
gctggtaaagcactaaaagaagcggttaattaa
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