Thiomicrorhabdus immobilis: THMIRHAM_11180
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Entry
THMIRHAM_11180 CDS
T08420
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THMIRHAM_11180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tib02000
]
THMIRHAM_11180
Transporters [BR:
tib02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
THMIRHAM_11180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_29
AAA_22
AAA_16
RsgA_GTPase
CbiA
ABC_ATPase
AAA_7
AAA_19
nSTAND1
AAA_5
nSTAND3
Sigma54_activat
PRK
AAA_18
AAA_23
NB-ARC
DUF5906
AAA_15
ATP-synt_ab
NACHT
AAA_30
TsaE
APS_kinase
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
BCN93333
LinkDB
All DBs
Position
1267127..1268755
Genome browser
AA seq
542 aa
AA seq
DB search
MSEANVLNVQNLVLKVGENCLIDNISFAIKPAEIFALVGESGSGKSLTSLAIMRLLPDVI
RVTAGDILLQQQSLFELPEYQMQKVRGKKVAMIFQEPMTSLNPVMKVGDQVAEVLKLHLG
LRNHAAREKVVALFEEVGIPEANVRFDWYPHQLSGGQKQRVMIAMALACEPDLLIADEPT
TALDVTIQAQVLDLLKSIRQQRGLSILFITHDMGVVYEMADTVAVMKQGKIVEQADKENF
FNHATHPYTRKLLEDAVPKQTLKPQLNSTKLLELNDLKVHFPIKKGLFQRTVGMVRAVDG
VSLIIEKGQTLALVGESGSGKSTIGQAILKLVNTTQGQVSYAGENDNQINLTDLSERQMK
PLRKKIQVIFQDPFSALNPRMTISEIIREGMVSLKVGSQNKQDQDERIDELLMQVGLLAE
HKHRYPHEFSGGQRQRIGIARALAVEPELIICDEPTSALDVTVRAQVLKLLEDLQQKYQL
SYLFITHDLSIIPSIAHKVAVMQNGKVVEQGTVEEIMHNPQQDYTKQLLNSAPELIRKVM
FA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagccaatgtgttgaatgtacagaacttagtgttgaaagtaggtgaaaactgc
cttatcgataacataagttttgctatcaaacccgcagaaatatttgcattggttggcgag
tccggtagcggcaagtcgctgacatccctagccataatgcgtttgcttccagatgtaatc
agggtgactgcaggtgacattttattgcagcaacagagtttgtttgaactgcctgaatat
caaatgcaaaaagtgcgtggtaaaaaagtcgccatgattttccaagaaccgatgacttcg
cttaaccctgtgatgaaagtgggggatcaagtcgccgaggtattgaaactgcacttgggt
ttaagaaaccatgccgcaagggaaaaggtggtcgcgttgtttgaagaggtcggtatcccg
gaagccaatgtgcgttttgattggtacccgcatcagctatcgggtggtcaaaaacagcgt
gtgatgattgcgatggcattggcttgtgaaccggatctgttgattgccgacgagccgacc
accgctttggatgtgactattcaagctcaagtactcgatttactgaagtcgattcgccag
caacgcggcctgtcgattttgtttatcactcatgatatgggagtggtctatgaaatggcc
gatacggttgcggtaatgaagcaagggaaaattgtagagcaagcggataaagagaatttt
ttcaaccatgccactcatccctatacacgtaaactacttgaagatgccgtacctaagcag
accttgaaacctcagctcaactctacaaagttattggaactcaatgatttgaaagtacat
ttccctatcaaaaaaggcctgttccaacgtacggtcggcatggtaagggcggtagatggt
gtcagtctgattattgaaaaaggtcagactttagccctggttggtgaatcgggttccggt
aaaagtaccattgggcaagccattttaaagctggtgaataccacacaaggccaggtgtct
tatgcgggcgaaaatgacaatcaaatcaacttaaccgatttatctgaacgccagatgaag
cctctgcgtaaaaaaatccaagtcattttccaagacccgttttccgcgctaaatccaaga
atgaccattagcgaaatcattcgtgaaggcatggtgagtcttaaggtgggaagtcaaaac
aagcaagaccaagatgaacgaatcgatgagttgctgatgcaagtggggctattggccgag
cataaacaccgttatccgcacgagttctctggcgggcaacgtcaacgtatcggtatagca
agagccttggcggtagagccggagctgattatttgtgacgaacctaccagcgcgttggat
gtaaccgtgagagcacaggtattaaaactgttggaagacttacagcaaaaatatcagctt
tcttacctgtttatcacccatgatttatccattatcccaagcatcgcccataaagtcgcg
gtgatgcaaaacggtaaagtggtcgagcagggtacggtagaagagataatgcataaccca
caacaagactacaccaaacaattgctcaactcagcgccagagctgatacgtaaggtgatg
tttgcttaa
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