Thiomicrorhabdus immobilis: THMIRHAM_11300
Help
Entry
THMIRHAM_11300 CDS
T08420
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tib03032
]
THMIRHAM_11300 (gyrA)
03400 DNA repair and recombination proteins [BR:
tib03400
]
THMIRHAM_11300 (gyrA)
Enzymes [BR:
tib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
THMIRHAM_11300 (gyrA)
DNA replication proteins [BR:
tib03032
]
Prokaryotic type
DNA Topoisomerases
THMIRHAM_11300 (gyrA)
DNA repair and recombination proteins [BR:
tib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
THMIRHAM_11300 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BCN93345
LinkDB
All DBs
Position
1278687..1281329
Genome browser
AA seq
880 aa
AA seq
DB search
MSEFAREIIPIALEDEMEQSYLSYAMSVIVGRALPDVRDGLKPVHRRVLYAMNELSNDFN
KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSPAAM
RYTEIRMSKIAHQLLADLEKETVNFSENYDGSESEPNVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTETVNACLAFIDNPDIDIDGLMEHIPGPDFPTHGLINGTSGIREAYETGRGRV
KIRSKTCVETDKSGKSQIIVNELPYQVNKAKLIERIAELVKEKKIEGITGLRDESDKDGM
RIVIELRRGEVPEVIINNLYKQTSMQTVFGVNMVALIDGQPKLLNLKQVVEAFVKHRREV
VTRRTIFDLRKAREKAHILEGLAVALNNIDEMIELIKASPSPAVAKERMLEKAWAIGSVV
DLLENVEMKDVRPEDLPEGFGAEGAFYKLSPAQAQAILEMRLHRLTGLEQDKIIEEYKGL
ILKIAEFLEILRNPDRLTEVVKEELVEVVENFGDARRTEIDYSYQDLDAEDLIAVEDRIV
TLSQDGYIKTQPLSDYRAQKRGGRGKSATAMKEEDEVGQLFVASTHDMLLCFSNKGKLYW
QKTWQLPLASRGSRGKPIVNVLPLEANEHITSVLPVNEFDDRVVFMATRNSIVKRVALKD
FSRPRANGIIAVDLLDDDELVGTALTDGEQEVMLFSNIGKAIRFKESDVRVMGRTARGVR
GMKLAGDAKVISMQIAKPGTLILTATEHGFGKCTPVEDYSTINRGGQGVISIKTTDRNGP
VVSAVSVNTDQEIVLITNKATLVRTRVAEISVVGRNTQGVKLINVGKGEQVVGLAVVDIE
EDEEVQIDSVDENAVMDLPATEVVADDNSPAENSEDSTEE
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttgcacgtgaaattattccaatagctttagaagatgagatggagcaatcc
tatttaagttatgcgatgagcgtaattgtagggcgagctttaccggatgtaagggatggt
ttaaaaccggttcaccgtcgtgttttatatgcgatgaatgaattaagtaacgattttaat
aaaccgtataagaaatcggcacgtattgtcggtgatgtaatcggtaaatatcacccgcat
ggcgataccgcggtttacgacacaatcgttcgtatggcccagcctttctcgttacgttat
atgttggttgatggtcaaggtaacttcggttcggtagatggtgactctccggcggccatg
cgttatacggaaatccgtatgtctaaaatcgcacaccagctgttagcggatttggaaaaa
gaaacggttaatttctcagaaaactacgatggctctgaatcagaaccaaacgtattgccg
acacgaattcccaatcttctagtgaacggttcttcggggattgcggtaggtatggcaacc
aatattccgccacataatttaactgaaacggttaatgcatgcttggcctttattgataat
cctgatattgatatcgatggtttgatggaacacattcctggtccagatttccctacacac
ggtttaatcaacggtacttctggaattcgcgaagcttatgaaacaggtcgtggacgcgtt
aagattcgttctaaaacgtgtgttgaaaccgataagtccggtaaatcgcaaatcattgtc
aacgaactgccttatcaggttaacaaggccaagctgattgagcgtattgctgaattggtc
aaagagaagaagattgaaggcattaccggtcttcgtgacgagtcggataaagacggtatg
cgtatcgtcattgaattgcgtcgtggtgaagtgcctgaggtaatcatcaataacctttac
aagcaaacgtcgatgcaaacggtgtttggtgtgaatatggtggcgctgattgatggtcag
cctaagctgttaaaccttaaacaggtggttgaagcctttgttaaacaccgtcgcgaagtt
gtgactcgccgcactatctttgatttacgtaaagcgcgtgaaaaagcacatatcttagaa
ggtcttgcggttgctctgaataacatcgatgagatgatcgagttaatcaaagcctctcca
agtcctgcggttgccaaagaacgtatgcttgaaaaagcttgggcgattggcagtgtggtg
gatctgctggaaaacgtagagatgaaagatgttcgtcccgaagatcttcctgaaggtttc
ggtgcagaaggcgctttttataaattgtcgcctgcgcaagcgcaagccattcttgaaatg
cgcctacaccgtctaaccggtttagagcaagacaaaatcattgaagagtacaaagggtta
attcttaaaattgccgaattcttagagattttaagaaatccagatcgtttgactgaagtg
gtcaaagaagagttggttgaagtggttgaaaacttcggtgacgcccgtcgtactgaaatt
gattacagctaccaagatttagatgcagaagatttaattgcggttgaagaccgtattgtg
accttgtcgcaagacggttatatcaaaacacagccgctaagcgactatcgtgcgcaaaaa
cgtggtggacgtggtaagtcggcaacggcaatgaaagaagaggatgaagtagggcaactg
tttgttgcgagtacgcatgatatgttgttgtgcttctctaacaaaggtaagttgtactgg
cagaaaacttggcagttacctttagccagtcgtggtagccgtggtaagccaattgtcaac
gtcctacctttagaagcgaatgagcacattacttcagtattgccggtcaatgagtttgat
gatcgtgtggtcttcatggcaactcgtaactcgattgttaagcgtgttgcgttaaaagat
ttctcgcgtcctcgtgccaacggtattatcgccgttgatttattggatgacgacgaattg
gtgggtaccgctttaacggatggcgaacaagaagtgatgttgttcagcaatatcggtaag
gcgattcgcttcaaagagagcgatgtgcgtgtaatgggtcgtaccgctcgtggggtgcgt
ggtatgaagttggcgggtgatgcaaaagtcatcagtatgcaaattgccaaacctggcacg
ttgattcttactgccaccgagcacggttttggtaagtgcacgccggttgaagattactca
accatcaatcgtggcggtcaaggggttatctcgattaagacgaccgatcgtaatggtcca
gtggtttctgcggtttcggtcaataccgatcaagaaatcgtactgattaccaataaggcg
actttggtgagaactcgtgttgctgagatttcggtagtgggtcgtaacactcaaggcgtt
aagctgattaatgttggtaaaggtgaacaggttgttggtttagcggtggttgatatcgaa
gaggacgaagaagttcaaatcgattcagtggatgaaaatgccgtaatggatttgcctgcg
accgaagtggtagcagatgacaattcaccagcagaaaattctgaagactcgaccgaagag
taa
DBGET
integrated database retrieval system
