Thiomicrorhabdus immobilis: THMIRHAM_11680
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Entry
THMIRHAM_11680 CDS
T08420
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tib03009
]
THMIRHAM_11680 (rluB)
Enzymes [BR:
tib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
THMIRHAM_11680 (rluB)
Ribosome biogenesis [BR:
tib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THMIRHAM_11680 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TnpB_IS66
Motif
Other DBs
NCBI-ProteinID:
BCN93383
LinkDB
All DBs
Position
complement(1320922..1321833)
Genome browser
AA seq
303 aa
AA seq
DB search
MNQPTDEKLQKILARAGFGSRRSVETLISEGHVKINGRTAKLGDRATAEDKIKVREQAVK
ETRLQKQPTQVILYNKPEGLLCTRSDDKGRETIFSQLPRIINGRWISIGRLDLNTSGLLI
LTNNGELANRMMHPSYEVEREYTVRVFGEISDEALKQVVKGVQLDDGPARFNKVSKMRTS
VDGESINKWYRVTIKEGRYREVRRIWEAVGVQVSRLHRVRYGQFTIPRNLRKGKTEELSW
KQVNQLLKSVDLKEEARPDLRPDSQVGQKKQKRMNSNAKPIARKPSSKRTIHDLSDGFNK
RRR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccaacagatgaaaaacttcaaaaaattctagcgcgtgctggttttggttca
agacgttctgttgaaaccttgatcagcgaaggccatgtgaagattaatggtcgtaccgct
aaactgggtgatagagcaacggctgaagataaaatcaaagtccgtgagcaagcggttaaa
gagactcgtctgcaaaaacaacctacacaggtgattttatacaacaagccagaaggcctt
ctttgcacacgtagtgatgataaagggcgcgagactattttcagccagttaccacgtatc
atcaatggccgctggatcagtataggccgtttggatttaaacaccagtggtttattgata
ttgaccaataatggtgagctggccaatcgaatgatgcatccatcttatgaggttgagcgt
gaatacacggtgcgtgtgttcggtgaaatcagcgacgaagcgttaaagcaagtggttaaa
ggcgttcagctagatgatggacctgcccgttttaataaagtttctaaaatgagaacctct
gtcgatggggaatcgatcaataaatggtatcgtgtgaccatcaaagaggggcgttatcgt
gaggttcgtcgcatttgggaagcggttggtgttcaagtaagtcgcctgcatcgtgtacgc
tatggtcaattcaccattccacgaaacctgcgtaaaggtaaaacggaagagttgagctgg
aagcaggtcaatcaattgctgaaatcagtagatttaaaagaagaagcgcgcccggattta
cgtccggatagccaggtcgggcagaaaaagcagaaacgtatgaattcaaatgctaaaccg
attgccagaaaaccgtcttcaaagcgaaccattcatgatttgagtgatgggtttaataaa
agaagacgctaa
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