KEGG   Thiomicrorhabdus immobilis: THMIRHAM_12120
Entry
THMIRHAM_12120    CDS       T08420                                 
Symbol
yoaA
Name
(GenBank) ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
tib  Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:tib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tib03400]
    THMIRHAM_12120 (yoaA)
Enzymes [BR:tib01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     THMIRHAM_12120 (yoaA)
DNA repair and recombination proteins [BR:tib03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    THMIRHAM_12120 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C
Other DBs
NCBI-ProteinID: BCN93427
LinkDB
Position
complement(1364309..1366249)
AA seq 646 aa
MKPSTDKNKTASNLTIDCVLGSEGTLSKLVEGYAPRQAQIDMANEVMALIEEDETLLAEA
GTGTGKTFAYLVPALLSGKKVIVSTATKTLQEQLVQKDLPILFKACEIAGKARLLKGRDN
YVCPQRLEVTETVEQHSKLDWKKLSQIRDWVDNKTLSGDKAELELVPESDPIWRKVCARM
EFCQATECHQDSGCFYPIVKQKALESQVLVVNHHLFCADLSLREQGYGEILPDADIYIFD
EAHQLPDIAAQFLGFSISRVQLEELVRDIKQAQKVEAPETKKISDLASMLEEQVKLINEA
LGKWEKRWTWNQLQDEKVFQVAIKRFIDVLTLVIGELKVVVERGKQLTAVHKRSQELLTQ
FNDWLTSQSENKIRWIESSQARFKFNLTPLSVAGPFSRQREEIGGAWLFTSATLSVRNNF
DYFAKRLGLDNAKTSCWKSPFDYQKQGVVYHPIGLPEPRSSEYIKVLLRAAWPLLKASNG
HAFMLFTSHKAMQEAKAILERHWDGQLLVQGDLPKLTLLQRFKDSDSAILLGTSSFWEGV
DVKGDDLKLVIIDRIPFAPPDDPIVQAREAYLKEKGLNGFAHFQLPEAVIAMKQGSGRLI
RDVSDSGVLMLCDPRLSTKGYGNTIRQSLPDFPWVYDASQAIERLK
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgaagccatctaccgataagaacaagaccgcatcgaatctaaccattgattgtgtatta
ggtagtgaaggtaccttatcaaaactggtggaaggttacgctcctagacaagcacagatc
gatatggctaacgaagtcatggctttaatcgaagaggatgaaactcttctggcagaggcg
ggaaccggtacgggtaaaacattcgcctatctagttccagccttattgtcaggtaaaaaa
gtcattgtctccacggcaaccaagactcttcaagaacagctggtgcaaaaagatttgccg
atactcttcaaagcctgtgaaattgctggcaaggcacgcctgctcaaagggcgtgataat
tatgtctgcccccagcgtttggaagttaccgaaacggtagagcaacatagtaaactggat
tggaaaaaactatcacaaattcgggattgggttgacaacaaaacccttagtggtgataag
gcggaattggaattggttccagaatcggatcctatttggcgtaaggtttgtgctcgcatg
gagttttgccaagcaacggaatgccatcaagattccggatgtttttatcctatcgtcaag
caaaaagcgctcgaatctcaagtgttggtggttaatcatcaccttttctgtgctgattta
tcgttacgcgaacagggttatggagagatccttcccgatgccgatatctatattttcgat
gaagcccatcaattgcccgatattgctgcgcagtttctaggcttctctatctcccgtgtg
cagttagaagagctggttagggatattaagcaagctcaaaaggtcgaagcgccagaaacc
aaaaagattagtgatttggctagcatgctggaagagcaggtaaagctaatcaatgaggca
ttgggcaagtgggaaaaacgttggacctggaatcaacttcaggatgagaaggtttttcaa
gtcgccatcaagcgattcatcgatgtgttaaccctggttattggtgaacttaaagtcgtg
gtcgagaggggaaagcaactgactgcggttcataaacgtagtcaggagttattgacccag
tttaatgattggttgacaagtcaatcggaaaacaaaattcgctggattgaatcttcgcaa
gcacgttttaaatttaacctgacaccgctaagtgtcgcaggaccattcagtcgccaaaga
gaagaaatcggcggtgcatggttattcacttcggcaaccttgagtgtaagaaataatttt
gattatttcgctaaacgtcttgggctggataatgcgaaaacatcttgttggaaaagcccg
tttgactaccaaaaacaaggtgtggtctatcatcccatcggattgcctgaaccaagaagc
agtgaatacattaaagtcttgctgagggcggcttggccattgctgaaagcgagtaatgga
catgctttcatgctcttcaccagccataaggcaatgcaggaggctaaggcgatattggaa
cgtcattgggatggacagcttctggtgcaaggggatttacccaaactcaccttgttacag
cgatttaaagactctgatagtgccatcctgctcggaaccagtagtttttgggaaggggtc
gatgttaaaggggatgatttaaaactcgttatcattgaccgtattccttttgcaccgccg
gatgatcccattgtgcaagccagggaagcttacctgaaagagaagggactaaatggtttt
gcgcattttcaattgcccgaagcggtcattgccatgaagcaggggtctggacgtttgatt
cgtgatgtcagtgatagcggtgttttaatgttgtgtgaccctcgtttatcaactaaaggt
tacggcaataccattagacagagcttgccggatttcccttgggtgtatgacgccagtcaa
gcaatcgaaagattgaagtaa

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