Thiomicrorhabdus immobilis: THMIRHAM_12150
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Entry
THMIRHAM_12150 CDS
T08420
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THMIRHAM_12150 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tib03032
]
THMIRHAM_12150 (rnhB)
Enzymes [BR:
tib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
THMIRHAM_12150 (rnhB)
DNA replication proteins [BR:
tib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
THMIRHAM_12150 (rnhB)
Elongation factors (archaeal)
THMIRHAM_12150 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Cas9_C_2
Cas_Csn2
Motif
Other DBs
NCBI-ProteinID:
BCN93430
LinkDB
All DBs
Position
complement(1367892..1368509)
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AA seq
205 aa
AA seq
DB search
MQQNLFENSTNHDFQSLSGTTVGVDEVGRGPLIGDVVACAVILPIGCELPLRDSKKLSEK
KRDALAELIKQEAVGYSIAVATPEEIDELNILHATMLAMQRAVSGLVEQGLAISQVYVDG
NRCPKIAHSCQSVVKGDDKVMEISAASILAKVYRDRQMLELHEKYPKYGFDQHKGYPTAK
HLTALKQFGMIPGYRKSFKPVKELC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaacctgtttgagaattcgacaaaccacgatttccaaagtttaagtggtacg
acggttggggttgatgaagtagggcgcggccctttgattggtgatgttgtcgcctgtgcc
gtcatcttgccgattggttgcgaactaccattaagagattccaaaaaactcagtgaaaaa
aaacgcgatgctttggctgaattaattaaacaggaagctgtcggttattccattgcggta
gcaactccagaagaaattgatgagttgaatatactgcatgcaaccatgttggctatgcaa
cgagcggtgtctgggcttgttgaacaaggtttggccatttcgcaagtttatgttgatggc
aatcgttgcccaaagattgctcattcctgccagtcggttgtcaaaggggatgacaaggtc
atggaaatcagtgctgcttctattttagccaaggtctatcgagataggcagatgttggaa
ttacatgaaaaatatccaaaatacggttttgatcaacataaaggttatcctacagccaaa
catttaacggctttaaaacaatttggcatgattcctggttatagaaagtcattcaaacca
gttaaagaactgtgttaa
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