Thiomicrorhabdus immobilis: THMIRHAM_13230
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Entry
THMIRHAM_13230 CDS
T08420
Symbol
ampD
Name
(GenBank) N-acetyl-anhydromuranmyl-L-alanine amidase
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tib01011
]
THMIRHAM_13230 (ampD)
Enzymes [BR:
tib01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
THMIRHAM_13230 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tib01011
]
Peptidoglycan biosynthesis and degradation
Amidase
THMIRHAM_13230 (ampD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
ComC
Motif
Other DBs
NCBI-ProteinID:
BCN93538
LinkDB
All DBs
Position
complement(1481615..1482211)
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AA seq
198 aa
AA seq
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MQNNSLNSFQTLKLRVDNQTGLIEGGQFIESPNQDLRPNDELPGLVVVHGISLPPNQFGG
EGITQLFTNTLNPKEHPYYQTIQHLTVSAHALIRRDGQIIQYVPFHKRAWHAGLSEYEGR
ERCNDFSIGIELEGTDSTCYTASQYHALAGLIKALWQAYPSLKDRKVVGHSDIAPGRKTD
PGDYFLWSSLNRLTETEA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaactcgcttaactcattccagaccctcaaattaagggtggataatcaaaca
ggcttaattgagggcggacaatttattgaaagtcccaatcaagacttgcgtccaaatgat
gagttaccaggcctggtggttgttcatggtattagcttaccgccaaaccagtttggaggc
gaggggataacccaattgtttaccaatacgctgaatccaaaagaacacccttattatcaa
acgattcagcatttgaccgtttctgctcatgccttgattagacgcgatggacaaatcatt
cagtatgttccattccataagcgagcatggcatgccgggctttctgagtatgaaggccgt
gagcgttgcaatgatttttcaatcgggattgagcttgaaggaaccgattcaacttgttac
accgcttcccaataccatgccttggccggtctcataaaagcgctttggcaggcttatcca
tctttaaaagatcggaaagtggtcggtcacagtgatatcgctcccggcagaaaaaccgat
ccaggagactattttttatggagttctttgaatcgtttgacagaaaccgaggcgtag
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