Thiomicrorhabdus immobilis: THMIRHAM_13770
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Entry
THMIRHAM_13770 CDS
T08420
Symbol
ntrC
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K07712
two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THMIRHAM_13770 (ntrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tib02022
]
THMIRHAM_13770 (ntrC)
Two-component system [BR:
tib02022
]
NtrC family
GlnL-GlnG (nitrogen regulation)
THMIRHAM_13770 (ntrC)
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GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
AAA
Tnp_22_trimer
MCM
Motif
Other DBs
NCBI-ProteinID:
BCN93592
LinkDB
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Position
complement(1534981..1536429)
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AA seq
482 aa
AA seq
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MSIKSDNVADSVEPIVWVVDDDASIRWVLEAALEDKPYLVKIFDSPLIALKSYDAFPPSV
VVSDVRMPDMDGLTFMEALHELDKNIPVIIMTAHADLDTAVKSFQSKAFEYLPKPFDIDE
VTTLVDRAIKRFKSGGVKKVKRSAKTDKQPLNIIGAAPAMQEVFRVLGRVSQLDVTVLIN
GETGTGKELVAQALHELSPRSEGPFVALNTAAIPRELLESELFGHEKGSFTGAHSQRVGR
FEQADGGTLFLDEIGDMPVDLQTRLLRVLNDGSFYRVGGKSAIQTNVRIVAATHQNMKQL
VREGKFREDLLYRLNIIRIKVPALRERAQDVPLLLRFYLEKEAKALGLEEKTLSKEVTQF
LSNLPWPGNVRQLRSLCTWLTIMAPDKTVYMEDLPLELQNPSEIEGDDCSGDNWEKPLRR
WSEAFLKSGREGLHTTAEQMFEKVLIEVAMNASGNHRQKAAVLLGWGRNTLTRKTQALGL
DE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaagagtgataacgttgcagatagtgtggaaccgattgtctgggttgttgat
gatgatgcttcaatacgctgggtattagaggccgctttggaagacaagccttatttggtc
aagattttcgattcgccgttaattgctttgaagtcttatgatgcgttccctccatccgtc
gtggtcagtgatgtacgtatgccggatatggatggcttgacctttatggaagcgttgcat
gagttggataaaaacattccggtcatcatcatgactgcgcatgcagatttagacacagcg
gtaaaatcgttccagagtaaagcgtttgagtatcttcctaaacctttcgatatcgatgaa
gtcaccacccttgtcgatagggcgattaaacgttttaaatcaggcggtgtcaaaaaggtc
aaacgctcggctaaaaccgataagcaacccctgaatatcattggtgccgctcccgcgatg
caggaggtcttcagggtgttggggcgtgtttcacaattggatgtcacggtgttgataaat
ggtgaaacaggtaccggtaaagagttggttgcccaagcattacatgagttaagcccaaga
tcggaaggcccttttgtggctttaaataccgccgccatccccagagaattattggagtct
gagctttttggacatgaaaaaggttcttttaccggagcgcactcacagcgagtaggacgt
tttgaacaggccgatggcggaactctgtttttagatgagattggtgatatgcctgttgat
ttgcaaacgcgtctgcttcgagtgttgaacgacggtagtttctatcgagtagggggcaaa
agtgctattcagaccaatgttagaatcgtagcggcgactcaccaaaacatgaaacagctc
gtgcgtgaagggaaattccgtgaggatttgctttatcgtttgaatattatccgtatcaag
gtaccagcgttaagggagcgtgctcaagatgtacctttgttgttacgtttctatttggaa
aaagaggctaaggcgttagggcttgaagagaagacattaagtaaagaggtgactcagttt
ttatccaatttaccctggcctggtaatgttagacagttaaggagtttatgtacttggctg
accattatggcgccagataaaacggtttatatggaagacctgcctcttgagttacaaaac
ccttcggagatagagggggacgattgtagtggtgataattgggagaaacctttgcgtcgt
tggtctgaagcgtttttgaaaagtggccgtgaaggtctgcatactaccgcagagcaaatg
tttgaaaaagtcttgatcgaagttgctatgaatgccagtgggaatcatcgtcaaaaagct
gcagtgttgcttggttggggacgaaataccctaacacgtaaaactcaggctttagggctt
gatgagtaa
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