Thiomicrorhabdus immobilis: THMIRHAM_14060
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Entry
THMIRHAM_14060 CDS
T08420
Symbol
glyA1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00260
Glycine, serine and threonine metabolism
tib00460
Cyanoamino acid metabolism
tib00630
Glyoxylate and dicarboxylate metabolism
tib00670
One carbon pool by folate
tib00680
Methane metabolism
tib01100
Metabolic pathways
tib01110
Biosynthesis of secondary metabolites
tib01120
Microbial metabolism in diverse environments
tib01200
Carbon metabolism
tib01230
Biosynthesis of amino acids
tib01240
Biosynthesis of cofactors
tib04981
Folate transport and metabolism
Module
tib_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
THMIRHAM_14060 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
THMIRHAM_14060 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
THMIRHAM_14060 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
THMIRHAM_14060 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
THMIRHAM_14060 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
THMIRHAM_14060 (glyA1)
Enzymes [BR:
tib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
THMIRHAM_14060 (glyA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Cys_Met_Meta_PP
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
BCN93621
LinkDB
All DBs
Position
complement(1562203..1563474)
Genome browser
AA seq
423 aa
AA seq
DB search
MFTKSMTIAGYDDLIADAIKNEENRQESHIELIASENYTSPRVMEAQGSYFTNKYAEGYP
GKRYYGGCEFADVVEQAAIDRAKELFGADYANVQPHSGSQANAAVYMALLNPGDTVLGMS
LAHGGHLTHGSHVSFSGKIYNAVQYGIDPVSGQIDYDEVQALANEHKPKMIIAGFSAYSQ
VIDWSKFREIADSVGAYLFVDMAHVAGLIAGGKYPNPVPFADVVTTTTHKTLRGPRGGLI
LCKSNPELEKKLNSAIFPGGQGGPLVHVMAAKAVAFKECLEPEWKTYCADVIANAKAMAK
VFMARGCDVVSGGTENHLFLVSLIEKGLTGKLVDAALDAAHITINKNSVPNDPMSPFVTS
GIRVGTAAATTRGFNEEDCTNLATWMCDVIDACDQANETWDETVVADVRAKVSALCEAKP
VYR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaaaatcaatgaccatcgctggctatgatgacttaattgctgatgcgattaaa
aatgaagaaaatcgccaagaatctcatattgagttaattgcatctgaaaactacacaagt
ccacgtgtaatggaagcccaaggctcttatttcacaaataagtacgctgaaggttaccct
ggcaagcgttattacggtggttgtgaatttgctgatgtagttgaacaagctgcgattgat
cgtgcaaaagaactattcggcgctgactatgcaaacgtacagccacactcgggttctcaa
gcaaatgccgcagtttatatggcgttgttaaacccaggtgatacggttttagggatgagt
ttggcacacggtggccacttaactcacggttctcacgtaagtttctctggaaaaatttat
aacgcggttcaatacggaattgacccagtttctggtcagattgattatgatgaagttcag
gcattagcgaacgagcataagcctaagatgatcatcgctggtttctctgcttattctcaa
gtaatcgactggtctaaattccgtgaaatcgccgattcggttggtgcctacttattcgtg
gatatggctcacgttgcaggtttgattgcaggtggtaaatatccaaaccctgttccattc
gcggatgtggtaacgacgactacccataaaacattacgtggacctcgtggtggtttgatt
ctttgtaagtcgaatcctgagttagagaaaaagctaaactctgctattttccctggtggt
caaggtggtcctttggttcacgttatggcggcaaaagcggtggcattcaaagagtgtcta
gagcctgagtggaaaacttactgtgcagatgtcattgctaacgctaaggcgatggcaaaa
gtgtttatggctcgtggttgtgatgtggtttcaggcgggacagagaaccacctgttcttg
gttagcttaattgaaaaaggtttgacaggtaagttggttgatgcggcattagatgcggcg
catattacaatcaataaaaactctgtaccaaatgaccctatgtcaccatttgtgacgtct
ggtattcgtgtgggtacggcagcggcaaccactcgtggtttcaatgaagaagattgcaca
aacttagcgacttggatgtgtgatgtgattgatgcttgtgaccaagcaaatgaaacttgg
gatgaaacggttgttgcggatgttcgcgcaaaagtttctgctttatgtgaagccaagcct
gtttacagataa
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