Thiomicrorhabdus immobilis: THMIRHAM_15080
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Entry
THMIRHAM_15080 CDS
T08420
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tib03009
]
THMIRHAM_15080 (rlmE)
Enzymes [BR:
tib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
THMIRHAM_15080 (rlmE)
Ribosome biogenesis [BR:
tib03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
THMIRHAM_15080 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
BCN93723
LinkDB
All DBs
Position
complement(1682345..1682965)
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AA seq
206 aa
AA seq
DB search
MARSKSSAGWLKEHFDDPYVLKAKQEGWRSRAVYKLQEIDDKDKLFKNGMCVVDLGAAPG
GWSQWTAHKIGSQGEVFALDILPVEPFAGVTFIQGDFREDEVYNNLLSALDGRDVDVVMS
DMAPNMSGNKGVDIPRAMYLVELCVELADQVLKKNGDLLMKVFQGEGYNELILNLKSKYD
KVITRKPQASRARSKEIYLLARGKKA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagtaaatcgagcgcaggttggttaaaagagcattttgacgacccttatgtt
ttgaaagctaagcaagaaggctggcgttctcgagcggtttataaactgcaagagattgat
gataaagacaaactgtttaaaaatggtatgtgtgttgtggatttaggtgctgccccaggt
ggttggtcacagtggaccgcacataaaatcggcagtcagggtgaagtgtttgctttagat
attttacctgttgagccttttgccggtgtcacctttattcaaggcgattttagagaagat
gaggtttacaataatctattgtcagcgctggatggtcgagatgtcgatgtggttatgtct
gacatggcgccaaatatgagtggtaacaagggggttgatattccccgcgcgatgtatttg
gtagagctttgtgttgagttggccgaccaagtcttgaagaagaatggcgatttgctgatg
aaagtttttcaaggtgagggctataatgaattaatcctcaacttaaagtccaaatatgac
aaggtcattacacgtaaaccccaggcttctagagcgagaagcaaagaaatttatttattg
gctcgtggtaaaaaagcttaa
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