Thiomicrorhabdus immobilis: THMIRHAM_15180
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Entry
THMIRHAM_15180 CDS
T08420
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tib03016
]
THMIRHAM_15180 (truA)
Enzymes [BR:
tib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
THMIRHAM_15180 (truA)
Transfer RNA biogenesis [BR:
tib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
THMIRHAM_15180 (truA)
Prokaryotic type
THMIRHAM_15180 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BCN93733
LinkDB
All DBs
Position
complement(1691892..1692599)
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AA seq
235 aa
AA seq
DB search
MQSQVEKALSSIANQPIDLHCAGRTDTGVHAVGQIAHFETDVTRPGKAWVQGVNTQLPGD
IRVRWAKPVDDEFHARFSAIARQYRYVIYNRDVHSAVLHNRVTWEPHYLDEKLMHQAAQS
LIGENDFSAFRASACQASHANREVQSIDVSRKGDMVFIDIQANAFLHHMVRNITGSLISV
GKKQQPVEWLADLLKARDRTQAAATAPASGLYFVNAIYPDELAIPQVQLNEMLWQ
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtctcaggttgaaaaagcgctttcgagtattgccaatcagccgattgacctacat
tgtgccggacgtaccgataccggagtgcatgctgttgggcagattgcgcattttgaaacg
gatgtgaccaggcctggtaaggcttgggtgcagggggtgaatacccagcttcctggtgat
atccgtgtgcgttgggcaaaaccggtcgatgatgaatttcacgctcggttttctgcaata
gcccgtcaatatcgctatgtgatttataatcgtgatgtgcattcggctgtgctacataat
cgggtgacttgggaacctcattatttggatgaaaagctcatgcatcaagcggcgcagagt
ctgattggtgagaatgatttcagcgctttcagagcttcggcctgtcaggccagtcacgct
aaccgtgaagtccagtcgattgatgtttcccgcaagggtgatatggtgtttattgatatt
caagcgaatgcctttttacaccatatggtgcgaaacattacaggatcattgatttcggtt
ggtaaaaaacagcaaccggtcgagtggttggctgatttactgaaagctcgggatagaacc
caggccgcggccacggcaccagccagtgggttgtattttgtcaatgcgatttatcctgat
gagttggctattcctcaagtacaacttaatgaaatgttgtggcaatag
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