Thiomicrorhabdus immobilis: THMIRHAM_16550
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Entry
THMIRHAM_16550 CDS
T08420
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00470
D-Amino acid metabolism
tib00550
Peptidoglycan biosynthesis
tib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THMIRHAM_16550 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THMIRHAM_16550 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tib01011
]
THMIRHAM_16550 (murD)
Enzymes [BR:
tib01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
THMIRHAM_16550 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tib01011
]
Precursor biosynthesis
Amino acid ligase
THMIRHAM_16550 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
ParA
CbiA
Motif
Other DBs
NCBI-ProteinID:
BCN93870
LinkDB
All DBs
Position
complement(1837851..1839254)
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AA seq
467 aa
AA seq
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MYLVAGLGVTGQSVLRYFKAQGEPCLAFDTRADFDVTALQQEYPDVEFALGEVPLKWLKK
FETIILSPGIAKSEPWVSALEKLGKQTIGDIELFARAVGAPVIAITGSNGKSTVTTITGL
ALAEAGYNVGVGGNIGEPALDLLLDDNEYDVYVLELSSFQLETTYSLTTASSTVLNVSED
HMDRYVGIEDYIQAKTKVFADTELAVIPFDLSEQGLIHHGDVVRFCASEGFVQSDKDYGI
IEHNNQAWLGHGQNPQVPLESMRLKGLHHQLNALAMLALCRPFNVENRHFETVLSQFTGL
PHRTELVVVHEDVTWINDSKGTNVGATQTALESIGKETLGKLILIAGGVGKDADFSGLKA
PVEQFCKKVVLFGRDQDLIAEALQSNQSSAIDLSKVEDLATAVAIALENSQPQDCVLFSP
ACASFDQFANYVQRGEIFVELVHQACASFDAALIPKDDSTEQPGQVG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagttgcgggtctaggtgttaccgggcagtcggtattacgttacttcaaagca
caaggggaaccttgtttggcatttgataccagagcggattttgacgttacggcgctacag
caagaatatcctgatgttgagttcgctttgggtgaagtgccgcttaaatggctaaaaaaa
ttcgaaaccatcattctaagtccaggcatcgccaagtccgaaccttgggttagcgctctt
gagaagctcggtaaacaaaccattggagatattgaactgtttgcccgtgctgtcggtgca
ccggtgattgcgattaccggttcaaatggtaaaagcaccgtcaccaccattaccggattg
gcccttgccgaagcgggatacaatgtgggtgtggggggcaatatcggcgagcccgcattg
gacttgttgttggatgacaacgaatatgatgtgtacgtcttagaactctccagttttcag
ttggaaaccacttactcgttaacaaccgcctcttccaccgtgttgaacgtttccgaagac
catatggatcgttatgtcgggatagaagactatatccaagccaagaccaaggtttttgcc
gatacggaattggcggtaatccctttcgatttaagtgagcagggcttgattcaccatggt
gatgtagtgcgtttctgcgcttcagaggggtttgttcaatcagataaagattacggtatc
atcgaacataataaccaggcctggttaggtcatggccaaaacccgcaggtgccgctggaa
tcgatgcgattgaaaggtttgcatcatcagttaaatgctttggcgatgttggctctatgt
cgtccattcaatgtggaaaatagacattttgaaaccgttttaagtcagtttacggggttg
ccacaccgtaccgaattagtggttgtccatgaagatgtcacttggattaacgattcaaaa
ggcactaatgtgggcgcgactcaaacggccttagagagtattggtaaagagacactgggt
aagttgattttgattgccggtggggtgggtaaagacgccgacttttcaggcttgaaagct
cctgttgaacagttttgtaaaaaagtggttttgtttggtcgtgatcaagacctcatcgcc
gaggcgcttcagtcaaaccaaagttcagcaatcgacttgagcaaagttgaagacttggcc
accgccgtggccattgccttggaaaattcgcaaccacaagattgtgtcttgttttcaccc
gcttgcgccagttttgaccagttcgcaaactatgtgcaacgtggcgagatttttgttgaa
ctggttcatcaagcctgcgccagttttgatgcggctttaatcccaaaagacgattcaaca
gagcaaccaggccaggtaggttaa
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