Thiomicrorhabdus immobilis: THMIRHAM_16620
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Entry
THMIRHAM_16620 CDS
T08420
Symbol
rsmH
Name
(GenBank) ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tib03009
]
THMIRHAM_16620 (rsmH)
Enzymes [BR:
tib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
THMIRHAM_16620 (rsmH)
Ribosome biogenesis [BR:
tib03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
THMIRHAM_16620 (rsmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_31
FtsJ
Methyltransf_25
Methyltransf_11
Methyltransf_3
GRDP-like
Met_10
TrkA_N
GCD14
Motif
Other DBs
NCBI-ProteinID:
BCN93877
LinkDB
All DBs
Position
complement(1847369..1848319)
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AA seq
316 aa
AA seq
DB search
MTEQTSNVDSQETHFSVLLNESLDGLNIKPDGVYIDGTFGRGGHSNALLKRLGENGRLIA
IDQDPEAIEYAKQHIHDSRFEIQYGSFEDVKAFCEARGLVGKVDGLLLDLGVSSPQLDDA
ERGFSFMREGPLDMRMNPEVGLSAKDWLKQVDEKTLKLVLQNYGEERFSGRIAREIKEAS
ERDELQTTLDLADLVKRVSPKTEKNKHPATRTFQAIRIAVNRELDVLKNVLESAVEILAP
GGRFSVISFHSLEDRIVKVFIRDQSMIKDLFPDSPIQIEVIEPVLKKIGKPIFPSTEECK
QNSRSRSAVLRIAEKL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagcaaacaagcaatgtggattcacaagaaacccatttttcagttcttttaaat
gagtctttagatggtttgaatatcaagccggatggtgtctatatagacggaacttttggg
cgtggtggccacagtaacgctttgttaaagcggttgggtgaaaacggccgtttaatcgcc
atcgaccaagaccctgaagccattgagtatgccaaacaacatattcacgacagtcgtttt
gagattcaatacggtagttttgaagatgtaaaggctttttgtgaagcacgaggtttggtt
ggcaaggtagatgggttgcttctggatttgggggtttcctctccacagttggacgatgct
gagcgtggtttcagttttatgcgtgaagggccacttgatatgcgaatgaatccagaagtg
gggttgagtgctaaagattggttgaagcaagtagatgaaaaaaccttgaaattggtttta
cagaattacggcgaagagcgtttctctggtcgtattgcgcgcgagattaaagaagcctcg
gagcgtgatgaattacaaacaacattggatttggcggacttggttaaaagagtgtcgccg
aaaacagaaaaaaataaacatccagccaccagaacctttcaggcaattcgtattgccgtg
aacagagagttggatgtgttgaagaatgtattagagtcagcggttgagatattagcacct
ggtggaagattttcggtcatcagcttccactccttagaagacaggattgttaaggtgttt
attagagatcaatcgatgattaaagacctgtttccagattcaccgattcaaattgaagtg
attgagccggtgttgaagaaaatcggaaagcctatctttccaagcacagaggagtgcaag
caaaactcaagatcacgtagtgcggtattgaggattgctgaaaaactataa
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