Thiomicrorhabdus immobilis: THMIRHAM_17230
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Entry
THMIRHAM_17230 CDS
T08420
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tib03019
]
THMIRHAM_17230
03009 Ribosome biogenesis [BR:
tib03009
]
THMIRHAM_17230
Messenger RNA biogenesis [BR:
tib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THMIRHAM_17230
Ribosome biogenesis [BR:
tib03009
]
Prokaryotic type
rRNA processing factors
THMIRHAM_17230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BCN93938
UniProt:
A0ABM7MET0
LinkDB
All DBs
Position
complement(1924418..1925887)
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AA seq
489 aa
AA seq
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MHNEEKVLVNVTPNETRVAWVENGVLQEVWVERANKRGLVGNIYMGKVDRVLPGMQAAFV
NIGLERAAFLHVSDICHKAIGHEDEECDDIAKLLHCGQKIMVQVIKDPLGTKGARITMQV
TIPSRMLVFMPVERALGVSQKIDGSDERERLREMVKTIPEYKSSEGGVIVRTVADGVEFH
EMRADMIYLQRLWSGVQEKARLARKPTLIYEDLPLYLRIMRDIPLERIEKIRVDSTETLK
KMKEFVDMYVMELNDRLGLYKGERPIFDLYNIEEEIQTALHKRVNLKSGGYLIIDQTEAM
TTIDVNTGAFVGHKNLEETIYRTNLEAAQAIARQLRLRNLGGIIILDFIDMDDVEHQQHV
LAALEKELSKDRVKTSISNISNLGLVEMTRKRTRESLERTLCEPCPVCSGRGTVKTAETV
AYEIFREITRMARSFDANQYRVIAAEEVVSRIMDEESSSVAELESFLNKSIRFQAESTYA
AEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgaagaaaaagttttagtgaatgtgaccccaaatgaaacccgtgttgcttgg
gttgaaaacggtgtgttgcaggaagtctgggtagaacgagccaataaaagaggtttggtc
ggcaatatctatatgggtaaagtcgaccgggttttgcctggtatgcaggctgcatttgta
aacatcggtttggagcgcgctgcttttcttcatgtatcggatatttgccataaagcgata
ggccatgaagatgaagagtgtgacgatatcgcaaaattgctgcattgcggccaaaaaatc
atggtgcaagtgataaaagatcctttaggtactaaaggtgcacgaattaccatgcaagtg
acgattccatcaagaatgctggtttttatgcccgttgaaagggcgttaggagtctctcaa
aagattgatggttctgatgaacgtgagcgcttgagggagatggtgaaaaccatacctgaa
tataaatcctctgaaggtggtgtgattgtgagaacggttgccgatggcgtagagtttcat
gaaatgcgcgccgatatgatttatttgcaacgcttgtggagtggcgtgcaagaaaaagcg
cgtttagccagaaaaccgacgctcatctatgaagatttaccgctctatctacggattatg
cgcgatatcccattagaaagaattgagaagattcgtgtggattcgaccgaaactctcaag
aagatgaaagagtttgtcgatatgtatgtcatggagctcaatgaccgtttgggattatac
aaaggtgagcgcccaatctttgatttatataatattgaagaagagattcaaaccgcttta
cataaaagagtgaatttgaaatcgggtggatatcttattatcgatcagaccgaagcgatg
acgacaatcgatgtgaacaccggtgcgtttgttggacataaaaacctcgaagagacgatt
tatcgaaccaatcttgaagcggcacaagcgattgcccgtcagttacgtctgcgtaatcta
ggcggtattatcattttggactttatcgatatggatgatgtcgagcatcagcagcatgtg
ttggcggcattggaaaaagaattaagcaaggatcgtgtgaaaacctcgatcagtaatatc
tcaaatttaggtttggttgagatgacgcgcaaacgcacgcgtgaaagtctagagagaact
ttgtgtgagccatgtccggtttgtagtggccgcggtacggttaaaaccgcagaaaccgtg
gcttatgagatatttcgtgagattacccgcatggcaagatcatttgatgccaaccaatac
cgtgtgatcgcggccgaagaggtggtttctcgcattatggatgaagagtctagcagtgtt
gctgagttggagtcgtttttgaataagagtatccgttttcaggcggaaagcacttatgcc
gcagaacagtttgatgtggtcatgatgtga
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