Thiomicrorhabdus immobilis: THMIRHAM_17350
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Entry
THMIRHAM_17350 CDS
T08420
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00541
Biosynthesis of various nucleotide sugars
tib01100
Metabolic pathways
tib01250
Biosynthesis of nucleotide sugars
Module
tib_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
THMIRHAM_17350 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tib01005
]
THMIRHAM_17350 (hldD)
Enzymes [BR:
tib01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
THMIRHAM_17350 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
tib01005
]
Core region
THMIRHAM_17350 (hldD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
BCN93950
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All DBs
Position
complement(1938400..1939368)
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AA seq
322 aa
AA seq
DB search
MIVVTGGAGFIGSNIVKALNEQGRTDIIVVDNLKNGKKFINIADCDIADYLDKEDFQQRI
FAEQGLPDIEAVFHEGACSATTEWDGKFMMDNNYEYSKDVLNYCLNWGIPFFYASSASVY
GDGPDFIEDRAYEKPLNVYGYSKFQFDQYVRQVLPKAKSQVVGFRYFNVYGPREQHKGDM
ASVAFKLHNQILAGEKLKLFGEYDGYGAGMQTRDFVYIEDVVKVNLWFLAHPEKSGIFNL
GPAAAEPFKNIAEAVIDFHGKGEIEYIPFPEHLKGAYQSFTQADNSALRAAGYDAPFHTV
AQGVKKYLTWLTENPTVLNFTK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgtaacaggtggtgcaggctttattggcagtaatattgttaaggcgttaaat
gaacagggccgtaccgatattattgtggtggataacttaaaaaacggtaaaaagtttatc
aacattgccgactgcgatatcgccgactacttggataaagaagactttcagcaacgtatt
tttgccgagcaagggctacctgacattgaagcggtgtttcacgaaggcgcctgttctgct
acaacggagtgggacggtaaattcatgatggacaataattatgaatattcaaaagatgtg
ctgaattattgcttaaattgggggattccattcttttacgcgtcatccgcttctgtttat
ggcgacggccctgactttattgaagacagagcttatgaaaaacctttgaatgtttacggc
tactccaagtttcagtttgaccaatatgttcgccaagttttgccaaaagccaaaagtcag
gttgtgggttttagatactttaatgtgtatggaccaagagaacagcacaagggcgatatg
gcgagtgtggcctttaagcttcacaatcaaattttagcaggtgaaaagcttaagctgttt
ggtgagtacgatggttatggtgccggtatgcagacccgtgattttgtttatattgaagat
gtggttaaggtcaatttatggtttttagcccacccggaaaaatcgggcattttcaattta
ggtcctgctgcggcagaaccctttaaaaacattgccgaagcggtgattgattttcatggt
aaaggtgaaattgaatacatcccatttccggagcatttgaaaggcgcttatcaaagcttt
actcaagcggataattcagccttaagagcggcgggttatgatgctccgtttcataccgtg
gctcaaggggttaaaaagtatttaacttggttaactgaaaacccgactgttttaaatttt
acaaagtaa
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