Thiomicrorhabdus immobilis: THMIRHAM_17550
Help
Entry
THMIRHAM_17550 CDS
T08420
Name
(GenBank) hypothetical protein
KO
K02280
pilus assembly protein CpaC
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
THMIRHAM_17550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tib02044
]
THMIRHAM_17550
02035 Bacterial motility proteins [BR:
tib02035
]
THMIRHAM_17550
Secretion system [BR:
tib02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
THMIRHAM_17550
Bacterial motility proteins [BR:
tib02035
]
Pilus system
Pilus assembly proteins
THMIRHAM_17550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON_like
BON
Motif
Other DBs
NCBI-ProteinID:
BCN93970
UniProt:
A0ABN6CXW6
LinkDB
All DBs
Position
complement(1959484..1960992)
Genome browser
AA seq
502 aa
AA seq
DB search
MGPLNAYAELAKTYNLTETDSQIIKFDKALKRAMIANPELATVKVLSKTELLVTGKGAGR
TQLIVTYRDTPSVDHQVTLNVAPDQSRKEEIESTITALLKDLNPKGTVKFELKNIWINPE
TSVRREVDIIGSKIDGDPILKTDRRKDKNVLQEESSKGSLNAQPLAGNYMVMLTGDVPNK
AQKKRIHSVISALGVSVINLVKVTGPQQVKLSVRVAEVVKGNPFRSGASIMDRRDRVNIA
PSGVLGTTMEFLLDLDTNLDKATLSVAHQDAFQIGVQPNGGNLFGVLSILEGNHLARVLA
KPELIVQSGETAEFLVGGEVPIPTAQNAETITVTYKEFGVRLRFSPIITESGDIQMTVAP
EVSNIDESAGAQTGSIVVPGFRSRRANTTITLASGQSFVIGGLIQDNLRSSVSKIPLLGD
IPIIGALFRSTSYEKDQSELAILVTPTFVEPIEEGAKIALPGENMDRPSAADGFFMGKIV
EMLPEGKSVLPELSVKIGLEKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggggcctttaaatgcctatgcggagttggcaaagacatacaatttaacggaaacggat
agtcaaattattaaatttgataaagctcttaagcgagcaatgattgcaaatccagagttg
gcaaccgttaaggtattgagtaaaaccgagttgctggtaacaggaaaaggcgcaggtcgg
acccaattaatcgtaacctatcgtgatactccttctgtcgatcatcaagtcacgcttaat
gttgctcctgatcagtcccgtaaagaagaaattgaaagcaccataacagctttgttaaaa
gatcttaatcctaaaggtactgtaaagtttgagttaaaaaacatttggataaatcccgag
acatctgtaagaagagaagttgatattatcggcagtaagatagatggtgaccctatatta
aagacggataggcgaaaagataaaaatgttctgcaagaagagagttctaagggaagtctg
aatgctcagcctttagcaggtaattacatggtaatgctgacaggagatgttccgaataaa
gctcagaaaaaacgtattcattcagttatttcagctttaggtgtaagtgttattaatttg
gtaaaggttaccggtccacaacaagtcaaattatcggtaagggttgcagaagttgttaaa
ggtaatccatttagaagtggcgcctcgattatggatcgtcgcgatagagttaatattgct
ccatctggggtgcttggaacaacgatggagtttttgctagatttagatacaaatttagat
aaggcaaccttgtcggtcgcccatcaagatgcgttccaaattggggttcagccgaatgga
gggaatttatttggcgtcctgtcgattcttgaagggaatcacttagcacgcgttttagct
aaaccagaattgattgtacaatcgggtgaaactgcagagtttttggtaggtggtgaggtg
ccgataccaaccgctcagaacgcagaaacgattaccgttacttataaagagtttggagta
cgtttacgctttagtcctattattacagaatcgggtgatattcaaatgactgtggcgcca
gaggtcagtaatatcgatgaaagtgccggggcgcaaactggaagtattgttgtgccggga
ttccgttcacgtagagcgaatacaaccattacgcttgcatcaggacaaagttttgtaata
ggtggtttgattcaagataatttacgttcttcagtctctaagattccattgttgggtgac
attcctattattggcgcattattccgttcaacgagttatgagaaagatcaatcagagttg
gctattttagtgacaccgacctttgtcgagcccattgaagaaggtgcaaagatcgctttg
cctggagaaaacatggatagacctagtgcagcggatggtttttttatgggtaaaattgtc
gagatgttgcctgaagggaagagtgttcttcctgagctttcggtgaagattggattggag
aaaccctaa
DBGET
integrated database retrieval system
