Thiomicrorhabdus immobilis: THMIRHAM_20440
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Entry
THMIRHAM_20440 CDS
T08420
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tib02000
]
THMIRHAM_20440
Transporters [BR:
tib02000
]
Other transporters
Pores ion channels [TC:
1
]
THMIRHAM_20440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Ig_NUP210_4th
Motif
Other DBs
NCBI-ProteinID:
BCN94259
LinkDB
All DBs
Position
complement(2305222..2307408)
Genome browser
AA seq
728 aa
AA seq
DB search
MKLNRITLAMLVASGVLVSQEIYAQQANDINASQDDSGQTLLQEVTVSASPVHEHEVFEV
PSQIDSVAGVDKMAAESGSLGQMLESIPGVNNMSAGTQSGKPVIRGMTGNRVKVLSNGQS
TDYQAYGTRHLANTDPYLAERIEVIRGPQSVLYGAEAMGGIVNVIQSDLPYGQKTAGELA
TEFNSNNQEKMLGAKVGAGSKEFAIQAGISKRSADNFTVPNVSTAPGDIPLDDRPLFVGE
VPNTNFENQSANIGFGYQQDWGTIELRHTQWLSKQNYLGVENNGTGFEAVASGQKLQNDE
TQLKAEIYTDNDWVIKPSWTHTRNAREASHDLPYETMAEDEGTPHYLDLLVKRDDVKLAL
EHPKVGDFEGELGFELTEKQQELRNGELTPTAHESKRAVYLFEEADYDKWLLQVGARYDW
HEVSAPLDGNNVHFVDEGIFDSSNNSRTFDVFSGSLGSTYRIDSNWSVAANLASGFRAPS
IFELYAGGEHGGVQAYQLGNPDLKAETSLNTDLSLRWQTPKTQMVATVYQNWVDNYIYLA
NELEADGVTLTTTTSESGATIPVMKAQQTNAVIHGLEFSLNHQFNQAWSTDLALELIDGA
DTRNNQDLPLMPANNLRINVHYQPSDFAGLQQQKITLGVKLVDSKNASGLYEPFSQFDTM
PIGTASTEAYALWNLGYQTQVKLDKQTLHLTAAVENLFDTAYVDFLNTYKGYTLNTGRNI
QLKARLDF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatcgtattacgcttgccatgttggtggctagcggcgtattggtgtctcaa
gaaatctacgcacaacaagcaaacgatattaacgcatcacaagatgacagcgggcaaacc
cttctgcaggaggttacggtttccgcatcgcccgttcatgaacatgaggtttttgaagtg
ccttcgcaaatcgatagtgttgcaggtgttgataagatggccgccgagagtggttcttta
gggcagatgctggaaagcattcccggggtcaataatatgtcggccggcacgcaatccggc
aagccagttatccgtggaatgacgggtaatcgcgtcaaggtattatccaacggacagtca
accgactatcaagcctatggcacacgccacctagccaataccgacccttatctagcggaa
cggatcgaagtgattcgtggtccgcaaagtgtgttgtacggtgcggaagcgatgggaggg
attgtcaatgtgattcagtctgatttgccttatggccaaaaaaccgcgggtgaattagcc
acagaatttaacagcaataaccaagagaagatgttgggcgccaaggtgggcgcgggctcc
aaagagtttgcgattcaagcggggatttctaaacgttctgcagacaactttaccgtgccg
aatgtctctaccgcgccaggcgatatcccgttagatgatagaccattatttgtgggtgaa
gtgccgaataccaactttgaaaaccagtcggcaaatatcgggttcggctatcagcaagat
tggggaaccatcgaattgcgccatacgcaatggctctctaaacagaactatttaggtgtg
gaaaataatggtactggttttgaggcggtcgcttccgggcaaaaactacaaaatgatgaa
acgcagctgaaagcggaaatctataccgataacgattgggtcatcaagccgagttggaca
catacccgtaatgcacgggaagcgtcacatgatttaccctatgaaaccatggcagaggat
gaaggcacaccacactacttagatttattggtgaagcgtgacgatgttaaattggctttg
gaacaccctaaagtgggtgattttgaaggggaactcggttttgaattaaccgaaaaacag
caggagttacggaacggtgaattaacgccaacggctcatgagagcaagcgtgcggtttat
ctgtttgaagaagccgattatgacaagtggttgctacaagtcggagctcgttatgactgg
catgaggtgagtgctcctttggatggcaataatgtgcattttgtagacgaggggattttt
gattcttcaaacaatagtcgaacatttgatgttttcagcggttctttaggctcgacttac
cgcatagattcaaactggagtgtggcggccaatctagccagcggtttccgtgccccgagt
atcttcgaactttatgcaggtggtgaacatggcggtgtgcaggcgtatcaactcggtaat
ccggatttaaaggcggaaacgtcattgaacacagacttatcactaagatggcaaacccct
aaaacccaaatggtggccacggtttatcaaaactgggtggacaactatatctatttggcg
aatgagttggaagccgatggtgtcactttaaccaccactaccagtgagtcgggcgcaacg
attcccgttatgaaggctcagcaaaccaatgctgtgattcacggtttggagttcagttta
aatcatcagtttaaccaggcctggtcaacggatttggcgttggaattgattgacggtgca
gacaccagaaacaaccaggacttgccattaatgccggcaaacaacttgcgtatcaatgtg
cattatcagcccagtgattttgccggtttacaacagcaaaaaatcaccttgggtgtgaag
ttggttgacagtaagaacgcatcgggactttatgagccgttctctcagtttgatactatg
ccgattggaaccgcctcaaccgaggcctatgcgttatggaatttaggttatcaaactcaa
gtgaaattggataaacaaacgctgcacttaactgccgcggttgagaatctatttgatact
gcctatgtggactttttgaatacctataaaggatatactttgaacacgggtagaaatatc
caattgaaagcacgtttggatttttaa
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