Thiomicrorhabdus immobilis: THMIRHAM_20920
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Entry
THMIRHAM_20920 CDS
T08420
Name
(GenBank) type II secretion system protein
KO
K02652
type IV pilus assembly protein PilB
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tib02044
]
THMIRHAM_20920
02035 Bacterial motility proteins [BR:
tib02035
]
THMIRHAM_20920
Secretion system [BR:
tib02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
THMIRHAM_20920
Bacterial motility proteins [BR:
tib02035
]
Pilus system
Pilus assembly proteins
THMIRHAM_20920
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_29
Rad17
AAA_22
AAA_23
AAA_33
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BCN94307
LinkDB
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Position
complement(2363576..2365327)
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AA seq
583 aa
AA seq
DB search
MVGAIQVVWIVDVIAKQKIKLVTMSEEMNTQVVRLGESLLNAELMNQNQMEFALQKQAVT
GERLGELLVRLGIVSEYDLAKHLATQTGIEFVDVDTVSKPNADILRMFNQEYCLNRGFLP
LFREGNELVVVIGNANIHDVKQAVTQRAGMNCKVKQGEFSKVLQAIRHNYFFIDNPVDKL
FLKEVSKIDKDKDQVLSPDNLIHYLLHLAVLQRATDIHIQPEPKSIHISFRVDGVLQPVF
AIPTTLKRLVAAIKRHADMDISDQLRPQDGSFSTNILSMPFDIRVSSLISEYGENIVMRL
LPSGMHVKGLNELGFFEEDLATLNNMFVHPHGILLMTGPTGSGKSTTLHAGLRSKGMVGK
NILTVEDPIEYKLPTICQTQVNRKAGYDFSHAIRQFLRHDPDVMLVGEIRDAETAHAAIT
AAETGHLVLSTLHVNSVLGVISRLQALDVPVQMIADSLVGVVNQRLARQICSHCKTTYQP
SDEELIYFPQESKEITLYSGEGCSHCKGTGYFGRIPLYEILYVDAELQEMIASNASRTEL
MRKLESSNFKTIETMALQQVLQGNTTLEEVTRLLGNSLERIAP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggttggcgcaattcaagttgtgtggattgtagacgttattgctaaacaaaaaataaag
ctggtcactatgtcagaagagatgaatacacaagttgttcgattaggtgaatcattactc
aatgcggagttaatgaatcagaatcagatggagttcgctttacaaaagcaagccgttaca
ggtgaacgcttaggtgagttgctggtaaggttaggaattgtttctgagtatgatttagcc
aaacatttagcaacgcaaacaggtattgagtttgtcgatgttgatacagtttctaagcct
aatgctgatattcttcggatgtttaaccaagagtactgcttaaatagaggtttcttaccc
ttgtttagagagggtaatgaacttgttgttgtaattggtaatgccaatatccatgatgtg
aaacaggcggttactcagcgcgcagggatgaattgcaaagtcaaacagggtgagttcagt
aaagtccttcaagcaattcgtcataattatttctttattgataatccagtagacaagctt
ttcttgaaagaagtttcaaaaattgataaagataaagatcaagttctttctccagataac
ttaattcattatctgttacatcttgcggtgcttcaacgtgccacggacattcatatccaa
cccgagccaaaaagtattcatatttcattccgtgtagatggtgttctacagcctgttttt
gcaattcctacaactttaaaacgtttagtcgctgccataaaacgtcatgctgatatggat
atttctgatcaattacgccctcaagatggaagtttctcaaccaatattctttccatgcct
tttgatatacgtgtttcctcgttaatctctgaatacggtgaaaacatcgtgatgcgtctg
ttaccaagtggaatgcacgttaaagggttaaatgaacttggtttctttgaagaagattta
gctactttgaataatatgtttgttcacccgcatggcatcttgctaatgactggaccgacg
gggtcgggtaaaagtacgacattacatgcaggcctacgatctaaaggtatggttggtaaa
aatatcctcacagtggaagatcctattgagtataagttaccgactatctgtcaaacacag
gttaaccgaaaagcgggttatgatttttcacacgccatacgccaatttttaagacatgac
cctgatgttatgttggttggtgagattcgtgacgctgaaacagcacacgctgccatcact
gcagctgaaacaggacacttagttttatccacattgcacgtcaatagtgtattgggggtg
atttctcgtttacaggcgctagatgtccctgtgcaaatgattgcagattcattagtcggt
gttgtcaatcaacgtttggcccgtcaaatatgttcacattgcaagacgacataccaaccc
agcgacgaagagttaatctattttccgcaagagtctaaagaaattacgctctatagcgga
gagggctgttcacactgtaaaggcacagggtattttggccgtattcctctttatgaaatc
ttatatgttgatgctgaattgcaagagatgatcgcttcaaatgccagtcgcaccgagtta
atgagaaagttagagtcttctaactttaaaaccattgaaacaatggctcttcaacaggtt
ttacagggtaataccactttggaagaggtgacccgtttattagggaatagcttagagcga
attgcgccatga
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