Thiomicrorhabdus immobilis: THMIRHAM_21490
Help
Entry
THMIRHAM_21490 CDS
T08420
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tib03000
]
THMIRHAM_21490
Transcription factors [BR:
tib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THMIRHAM_21490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
I_LWEQ
Motif
Other DBs
NCBI-ProteinID:
BCN94364
LinkDB
All DBs
Position
complement(2425215..2426171)
Genome browser
AA seq
318 aa
AA seq
DB search
MTEETFENANSTNFLIRHASLRQIQIFESVARNLSFTRAAEELFLTQPTVSAQVKSLVEA
IEMPLYEQLGRQIHLTEVGEQVACSCRDVMRQLSNLETTLDEFKGLKRGRLRISVISTAK
YFAPLVLGEFCKQYPKTELGLEIINRENIFKRIMRNMDDLYILGQIPPSDMELNVIPFSP
NPLVIIAHKEHPLVGQKVSLKRLAKEPFLMREEGSGIRLAVEKRFANQDLKVNQRLVLDS
NEAIKQCVNAELGVACVSKHALQLHSNDSPFAILDVEGFPIEKQWNIVYPKNKQLSVIAN
EFLSFLLDKGMDFIKLPK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaacttttgaaaacgcaaatagcaccaactttctgattcgacatgcctcg
ttacgtcaaattcaaatttttgaatcggtggcacgtaatttgagctttacccgtgcggca
gaagaattgtttcttacccagcctacggtttctgctcaggttaaaagtttggtcgaggcc
attgaaatgcctttgtatgagcagttaggtcgccaaatccacttaaccgaagtgggcgaa
caagtggcgtgcagttgccgagatgttatgcgtcagctgtccaacttggaaaccaccttg
gacgaatttaaagggttaaaacgtgggcgtttgagaatatcggtgatttcaaccgccaaa
tattttgcccctttggtcttgggcgagttttgtaaacaataccctaaaaccgagttggga
cttgaaatcatcaaccgcgaaaacatcttcaaacgcattatgcgtaatatggatgacctc
tatattttggggcaaattccacccagtgacatggaattaaatgtgatccctttttcgccc
aacccattggtgatcatcgcccataaagaacaccctttggttggacaaaaagtgagctta
aagcgtttagccaaagaaccgtttttaatgcgtgaagagggttcgggaatccgtttggcg
gttgaaaaacgttttgccaatcaggatttgaaagtcaatcagcgtctagtcttagactcc
aatgaagccattaaacaatgtgtgaatgccgagctaggtgtggcttgtgtatccaaacac
gccctgcaactccactcaaatgacagcccattcgccatcttggatgttgaagggtttcca
attgaaaaacagtggaatatcgtctacccaaaaaacaaacaactctctgtgattgccaat
gaatttttatcgtttttgttggataaaggcatggatttcattaaactaccgaaatga
DBGET
integrated database retrieval system
