Thiomicrorhabdus immobilis: THMIRHAM_21500
Help
Entry
THMIRHAM_21500 CDS
T08420
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tib03000
]
THMIRHAM_21500
Transcription factors [BR:
tib03000
]
Prokaryotic type
Helix-turn-helix
LysR family
THMIRHAM_21500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_24
HTH_IclR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BCN94365
LinkDB
All DBs
Position
complement(2426327..2427280)
Genome browser
AA seq
317 aa
AA seq
DB search
MTDSHLTHTSNFLIRHASLRQIQIFESVARNLSFTRAAEELHLTQPTVSSQVKSLVEAVD
MPLYEQIGRQVHLTEVGEQVACACRDVINELSNLESMLDDFRGMKRGRLRISVISTAKYF
APLVLGEFCKTYPKIELGLKITNRENVFKRIEQNMDDLYILGHIAPEELSLNTLAFAPNP
LVVIAPKNHPLVGQKVSLKRLAKEPFLMREKGSGIRLTVEKAFEDKGLKVNERLTLDSNE
AVKQCVVAELGVACVSKHALQLHSYDGPVAILDVEGFPIEKQWNIVYPKNKHLSVIAAEF
LKFLMEKGNDYISLEKH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacagattctcatttaacccacacctcgaattttttaattcgtcacgcttcattgagg
caaatacaaatctttgaatcggtcgcgcgtaacttaagttttacccgtgccgccgaagag
ttgcatttaacccaacccaccgtatcgtcgcaagtaaagagtttggttgaagccgttgat
atgccgttgtatgaacaaattggccgtcaagtgcatctaaccgaagtgggcgaacaggtg
gcctgcgcttgccgagatgtgattaatgaattgtcaaacctagagagcatgttggatgat
ttcagaggcatgaaacgtgggcgcttaaggatatcggtaatttcaaccgccaaatatttt
gcccctttggtcttgggtgaattttgtaaaacctatcccaaaattgagctgggtttaaag
atcaccaaccgcgaaaacgtctttaaacgtattgagcaaaatatggatgacctatatatt
ttaggtcacattgcgccagaagagttgagcttgaacacgctcgcgtttgcgcccaaccct
ttagtggttattgctcccaaaaaccaccctttagtggggcaaaaagtcagtttgaaacgt
ttggccaaagaaccttttttaatgcgagaaaagggttcagggattcgtctcaccgttgaa
aaagcgtttgaggataaaggcctaaaggtcaatgaacgtcttactttagacagcaatgaa
gcggttaaacaatgtgtggtggccgaactgggcgtggcttgtgtttctaaacacgcctta
cagctacacagctacgatggaccggtggctattttggatgtagaagggtttccgattgaa
aagcaatggaatattgtctaccccaaaaacaaacatctttcggtcattgcggccgagttc
cttaagtttttaatggaaaaaggcaacgactatattagtttagaaaaacactga
DBGET
integrated database retrieval system
