Thiomicrorhabdus immobilis: THMIRHAM_22010
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Entry
THMIRHAM_22010 CDS
T08420
Symbol
kdnA
Name
(GenBank) 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase
KO
K19715
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase [EC:
2.6.1.109
]
Organism
tib
Thiomicrorhabdus immobilis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tib01005
]
THMIRHAM_22010 (kdnA)
Enzymes [BR:
tib01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.109 8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase
THMIRHAM_22010 (kdnA)
Lipopolysaccharide biosynthesis proteins [BR:
tib01005
]
Lipid A
THMIRHAM_22010 (kdnA)
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
BCN94416
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Position
2484364..2485551
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AA seq
395 aa
AA seq
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MPGFEIFDESEKQQINEVMEKGFTFRYNFDGMRNDVWKARELESMICETINVKHAHLVSS
GTTALTTALMAAGIGAGDEVIVPPFTFVASVEAIVLAGAIPVFAEIDETLTLSAEGIEAV
ITPKTKAVNFVHMCGYGGHMDDIKAVCDKHGLILLEDACQATGANYKGQALGTIGQVGTF
SFDSVKTISCGEGGAVLTNDETIYNNAHMFSDHGHDHIGMDRGAESHPIMGSNFRISEMN
AAVGVAQWKKLDRILEIQRRNKKALKDALKEYPEVSFRVITDEAGDNAGFLSIMLPTEAR
TKEVVATLAEQKVPAVFYWYANNWHYLKNWKHIHEMKSSAKLPIDLIADRPDYTQVKTPK
SDDIMSRTISMLIQLSWTEEDIQSRIDAFAKVFKK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttttgagatttttgacgaatccgagaaacaacaaatcaatgaagtgatggag
aaaggctttacctttcgctataactttgatggtatgcgtaacgacgtatggaaagcccgt
gaattagaaagcatgatttgcgaaaccattaatgtaaaacacgcacacctagtttcaagc
ggcacaaccgctttgacaaccgctttaatggcggcaggcattggtgcaggtgatgaagtg
attgtgccgccgtttacctttgtggcgagtgtagaagcgattgttctagcgggtgcgatt
ccggtatttgccgaaattgacgaaaccctaaccttatccgcggaaggcattgaggcggtt
atcacccctaaaaccaaagcggtaaactttgtgcacatgtgcggttatggcggccacatg
gacgacatcaaagcggtgtgtgacaagcacggtctaattttattagaggacgcgtgccaa
gcaacgggagcaaactataaaggacaagctttaggcacaattggtcaggttggaaccttc
tcattcgactccgtcaaaaccatctcttgtggtgagggtggcgcggtgttaactaatgat
gaaaccatctacaacaacgcccatatgttctcggaccatggacacgaccatatcggtatg
gatcgtggcgcggaatctcacccgattatggggagcaacttccgaatctctgaaatgaac
gcggccgtaggtgttgcgcagtggaaaaaactcgaccgaatccttgagattcaacgtcgc
aataaaaaggctctgaaagacgctttaaaagagtacccggaagtgtcattccgcgtgatt
accgatgaagctggagataacgctggatttttaagcattatgctgcctacggaggcacgt
actaaagaagtcgtggctacgctagcagagcaaaaagtacctgcggtgttttattggtat
gccaacaactggcactatctaaaaaattggaaacacatccatgagatgaaaagctcggct
aaactgccgattgacttgattgccgaccgtcctgattacacccaggttaaaacccctaaa
tcagacgatattatgagtcgtaccatttcgatgttgattcaattgtcctggacagaagaa
gacattcagtccagaattgacgcattcgctaaagtatttaaaaaataa
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