Thermococcus indicus: FH039_00685
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Entry
FH039_00685 CDS
T07099
Symbol
radA
Name
(GenBank) DNA repair and recombination protein RadA
KO
K04483
DNA repair protein RadA
Organism
tic
Thermococcus indicus
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tic03400
]
FH039_00685 (radA)
DNA repair and recombination proteins [BR:
tic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FH039_00685 (radA)
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Gene cluster
GFIT
Motif
Pfam:
Rad51
Intein_splicing
LAGLIDADG_3
HHH_5
RecA
Hom_end
Cdd1
HHH
HHH_2
AAA_25
IMS_HHH_1
DNA_pol_lambd_f
LAGLIDADG_WhiA
IMS_HHH
ATPase
HHH_8
RecR_HhH
SAM_BAF
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QDA30422
UniProt:
A0A4Y5SJM8
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Position
119972..122482
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AA seq
836 aa
AA seq
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MPRKKKADDEIKELEEFEELDVVEESPSSSTKKKKEKEIKTLEDLPGVGPATAEKLREAG
YDSIEAIAVASPMELKEIAGISEGAALKIIQAAREAANIGTFMRADEYMERRSTIGKIST
GSKSLDKLLGGGIETQAITEVFGEFGSGKCFAKDTKVYYENDTFVHFETIEGMYEKYRAL
GGEVPFDTGFAVPLETVRVYTFDPATGEIKRTKASYLYREWVRKILQLNLSRGRKLRITA
VHPVLVFRNGLQWVRAGELREGDVIVGVRKVPANSAHLSEEMAYFLGLFVAEGTSNPLSI
TTSSEQLRDFIVEFIKRHDGYEPKVEVRRGLYRILLRKKTAKWLGELSASNSQSKVVPEE
ILNGDEDTIVSFLAGYLDGDGHVAESHIEFVTKSRNLAEGIVFLLKRLGISPTVSEKVTN
GETYYRIFITGEDRASLSSVLEVSLLKNSKLPGGGVGRYPPAVARYLSDLYSEFRLPKRD
GETAYHILTRNKNVWFTERTLERISDYFRDALNRLELAKNAIENGEKPELPFPWTVLRKY
GFTDRQISNYRARGLPKREPLRGRVISALLREIEEHEKIARKAIEFIELLKKLEFYEVKS
VELVDYNDWVYDLVVPETHNFIAPNGLVLHNTQLAHTLAVMVQLPGEEGGLHGSVVWIDT
ENTFRPERIRQIAEARGLDPDETLKNIYVARAFNSNHQMLLVERAEEIIKEKAETDRPVK
LLVVDSLMAHFRSEYVGRGTLAERQQKLAKHLADLHRIADLYDIAVFVTNQVQAKPDAFF
GDPTRPVGGHILAHSATLRIYLRKGKAGKRVARLIDSPHLPEGEAIFRITDKGAED
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaagaagaaggctgacgatgaaataaaagagctcgaggagtttgaggagctc
gatgtcgttgaggagtccccgtcaagctcaaccaagaaaaagaaggagaaggagataaag
accctcgaagacctacctggtgtcggtccggcaaccgccgagaagcttcgcgaggccggc
tacgacagcatcgaagccatagcggttgcatctcccatggagctcaaggagatagcggga
ataagcgagggtgcggcactcaagataatccaggccgccagagaggccgccaacatcgga
accttcatgagggcagacgagtacatggagcggaggagcaccatcggcaagatatccact
ggaagcaagagcctcgacaagctcctcggcggtggaatcgaaactcaggccataaccgag
gtcttcggtgagttcggaagcggaaagtgctttgccaaggatacgaaagtttactacgaa
aacgatactttcgttcactttgagactatagaggggatgtacgagaagtaccgggctttg
gggggggaggttcccttcgacactggctttgcggttccactggaaacagtcagggtctac
acctttgatcctgcgaccggagaaataaagcgcactaaggcatcttatctgtaccgcgag
tgggtcagaaagatacttcagcttaacctctctcggggacggaagctcaggataaccgca
gttcacccggttcttgtcttcagaaacggccttcagtgggttcgtgctggggagctcagg
gaaggcgatgtgattgttggcgttcgcaaggttcccgcaaattctgcacacctgtccgag
gagatggcctatttcctcggtctattcgttgcggaggggacgtcgaatccgctctcaata
acgacatcctctgaacagctcagggatttcatcgttgagttcattaagcgccatgacggc
tacgagccaaaggttgaagttaggcgcggtctctacaggatactcctccgcaagaaaacg
gcgaagtggcttggggagctctcggcttcgaactctcaaagcaaggtcgttccggaggaa
atactcaacggtgacgaggacacgatagtaagcttcctcgccggctacctcgacggtgat
ggtcacgtcgccgaatcccacattgagttcgtcaccaagagcaggaacctggctgaaggt
atcgtcttcctgctgaagcgcctcgggatttccccaacggtctccgagaaggtcacaaac
ggagaaacctactacaggattttcataactggtgaggacagggcttctctcagctcggtt
cttgaggtttccctcctcaaaaactcgaagctacctggaggtggcgttggtcgctatccc
ccggcagtggccaggtacctctctgatctttactctgaattcaggctgccaaagagggat
ggtgaaactgcgtaccacatcctgacacgcaataagaacgtctggttcaccgagaggact
ctcgaaaggatctctgactatttcagggatgccctcaacaggcttgaactagcaaagaac
gcaattgaaaacggggagaaaccagagcttccgttcccgtggacggttctcaggaagtat
ggctttaccgataggcagatttcaaactaccgtgccaggggacttccaaagcgcgaaccc
ctcaggggcagagtaatctcggccctcctgcgcgagattgaagagcacgagaaaattgct
agaaaagccattgaattcattgagctccttaaaaaactggaattctatgaggtaaagtcc
gttgaacttgttgattacaacgactgggtctacgacctggttgtccctgagacccacaac
ttcatagcgccgaacggcctcgtccttcacaacacccagctggcgcacaccctcgcggtg
atggttcagcttcctggggaggaagggggcctccacggctctgtcgtttggatagacacc
gagaacaccttcaggccggagagaataaggcagatagccgaggctaggggcctcgacccg
gacgagacgctcaagaacatctacgttgcgagggcgttcaacagcaaccaccagatgctc
ctcgtcgagagggctgaggagataatcaaggagaaggccgagacggacaggccggtaaag
ctccttgtcgttgattcactcatggcccacttcaggagcgagtacgtcggcagggggacg
ctggcggagaggcagcagaaactggccaagcacctcgccgaccttcacaggatagcggac
ctctacgatatagctgtcttcgtcaccaaccaggtgcaggcgaagccggatgcatttttc
ggcgacccgacgaggccggtcggtggccacatcctcgcccacagcgcgaccctgagaatc
tacctgaggaagggcaaggccggcaagcgcgtcgccaggctcatagacagcccccacctt
ccggagggtgaggcgatcttcaggataactgacaagggcgccgaggactga
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