Thermococcus indicus: FH039_03020
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Entry
FH039_03020 CDS
T07099
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tic
Thermococcus indicus
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tic03016
]
FH039_03020
Enzymes [BR:
tic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FH039_03020
Transfer RNA biogenesis [BR:
tic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FH039_03020
Prokaryotic type
FH039_03020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
SIR2_2
Motif
Other DBs
NCBI-ProteinID:
QDA32279
UniProt:
A0A4Y5SPR5
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All DBs
Position
564932..565936
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AA seq
334 aa
AA seq
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MARDEVRRILPADIKREVLIKDEKAETNPKWGFPPEKRPMDMHMQFGIINLDKPPGPTSH
EVVAWIKRLFDLNKAGHGGTLDPKVSGVLPVALERATRVVQALLPAGKEYVALMHLHGDV
PENKIRAVMKEFEGEIIQRPPLRSAVKRRLRTRKVYYIEILEIDGKDVLFRVGVEAGTYI
RSLIHHIGLALGVGAHMAELRRTRSGPFKEDETLVTLHDLIDYYHFWKDDGIEEYFRKAI
QPMEKAVEHLPKVWIRDSAVAAVTYGADLAVPGIVKVHRGIKKGDLVAVMTLKDELVALG
KATMTSGEMMQKSKGIAVDVDKVFMPRDWYPKMW
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggacgaagtgaggagaatcctccctgctgacataaagcgagaggttctgatt
aaggacgagaaggccgaaacgaatccaaagtggggcttcccgccggagaagaggcccatg
gatatgcacatgcagttcgggataataaacctcgacaagccccccgggccgacgagccac
gaggtcgttgcctggatcaagaggctcttcgacctgaacaaggctggccacggcggaact
ctcgaccccaaggtcagcggcgttttgccggttgcccttgagagggccacgagggtggtc
caggcactcctgccggcgggaaaggagtacgtggctctgatgcatctccacggcgacgtc
cctgagaacaaaatccgcgccgtgatgaaggaattcgagggcgagataatccagaggcct
ccgctcaggagtgcggtcaagagacgcttaaggacgagaaaggtttactacattgagatt
ctggagatagacggcaaggacgtgctcttccgcgttggagttgaggcgggaacctacatc
aggtcgctcatccaccacataggccttgccttgggggtcggtgcccacatggccgagctg
aggaggacgaggagcggtcccttcaaggaggacgaaaccctcgtgacccttcacgacctc
atagactactaccacttctggaaggacgacggcatcgaggagtacttcaggaaggcgata
cagcccatggagaaggcagtggaacacctccccaaggtgtggatcagggattcagcggta
gcagcggtaacctacggcgccgacctggccgttccgggtatagtgaaggttcacaggggc
attaagaagggcgacctcgtcgccgtcatgaccctcaaggatgaactcgttgcccttggc
aaggccaccatgacgagcggcgagatgatgcagaagagcaagggaatagcggtcgatgtg
gacaaggtctttatgccgagggactggtatccgaagatgtggtga
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