Thermococcus indicus: FH039_04135
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Entry
FH039_04135 CDS
T07099
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
tic
Thermococcus indicus
Pathway
tic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FH039_04135 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tic03021
]
FH039_04135 (rpoA2)
Enzymes [BR:
tic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FH039_04135 (rpoA2)
Transcription machinery [BR:
tic03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FH039_04135 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SMC_ScpA
Motif
Other DBs
NCBI-ProteinID:
QDA30954
UniProt:
A0A4Y5SKM8
LinkDB
All DBs
Position
complement(751359..752534)
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AA seq
391 aa
AA seq
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MVAAKTIKSLVDKADLPENLREELYNKLVEYNKKYKLKKAEIEAIIEETVREYQNALVEP
GEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTVYL
DEKHRHDREKALEVARRIEGTTLENLAREMSIDILNYEFIVDIDLERLEKAGLDMEKVQR
KLEGSFKSAEFEVDGYTLIMRPKKVGKLSDLRRLAEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIADVLGIEAARNAIIEEIVNTMREQGLEV
DVRHIMLVADMMTLDGVILPIGRHGIVGEKASVLARAAFEITTQHLFEAAERGDEDPLNG
VVENVLIGQPVPVGTGMVKLAMNLPLRPKRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagcgaagaccatcaagagcctggtggacaaggcagacctcccggagaacctc
agggaggagctctacaacaagctggtcgagtacaataagaagtacaagctcaagaaggcg
gagatagaggccatcatcgaggagaccgtccgcgagtaccagaacgccctcgtcgagccg
ggggaggccataggaaccgttgccgcacagtccattggtgagccctcaacgcagatgacc
ctcaacaccttccactacgcgggtgtcgcggaaatcaacgtcaccctcggtctgccgaga
atcatcgagatcgtcgatgcgagaaagaacccatccaccccgatcatgaccgtttacctc
gacgagaagcaccgccacgacagggagaaggcccttgaggtcgcgaggaggatcgaaggt
accaccctggaaaacctcgcccgcgagatgagcatcgacatactcaactacgagttcata
gtggacatcgatctggagaggcttgagaaggccggtctggacatggagaaggtccagagg
aagctcgagggctctttcaagagcgctgagttcgaggtcgatggatacacgctcataatg
aggcccaagaaggtcggaaagctctccgacctcaggagacttgccgaaaaggttaaaaag
caccgccttaaaggcctctcgggcgtcgggaagaccatcataaggaaggaaggcgacgag
tacgtcatctacaccgagggttcgaacttcaagcaggtgctcaaggtcccgggcgttgac
cctacgagaaccaggacgaacaacatctgggagatcgccgacgtgctcggcattgaagcg
gcaagaaacgccatcatagaggaaatcgtcaacacgatgcgcgagcagggtctcgaggtt
gacgtcaggcacatcatgctcgtcgccgacatgatgacgctcgacggtgtgatactgccc
ataggcaggcacggtatagttggggagaaggccagcgtgcttgccagggccgccttcgag
ataaccacccagcacctcttcgaggccgctgagaggggcgatgaggaccccctcaacggt
gtcgtggagaacgtgctgatagggcagccggttccagtcggaaccggaatggtcaaactg
gcaatgaatctccccctgagaccgaaaagggagtag
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