Thermococcus indicus: FH039_04145
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Entry
FH039_04145 CDS
T07099
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tic
Thermococcus indicus
Pathway
tic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FH039_04145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tic03021
]
FH039_04145
Enzymes [BR:
tic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FH039_04145
Transcription machinery [BR:
tic03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FH039_04145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
DUF5817
Auto_anti-p27
Zn_ribbon_NOB1
RNA_pol_Rpb2_45
FLgD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDA30956
UniProt:
A0A4Y5SJG9
LinkDB
All DBs
Position
complement(755258..758626)
Genome browser
AA seq
1122 aa
AA seq
DB search
MASRGPTVVDVTPDDLWLVMDAYWKERGLVRQHLDSYNAFIEGGMQQVIYEFGGLKPDIP
DFEVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPLYLELIPVIKGIEQEPVEV
RIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDERQNRIIAKVFSYRHGYRALITVERRKDGILYVNIPNVPRPVKFVYVMRALGLLSDK
EIVEAVSDDPRIQQVLFDNLEDASDVMNQEDALDYIGKLSLPGQPKEYRLRRAEHIIDNN
LLPHMGVEPERRKAKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLRDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGAWPGGRT
GVSQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLSLMSQITTGIPEEEVREYLNKLGVVSIEERRPSPELWRLYLNGVLIGTIEDGESLVRR
IRSDRRSGKISDVINVAIYQDEEVREIYVNSDDGRVRRPLIIVENGQPKLTKEHVDAIKS
GALTWNDLVKMGIIEYLDAEEEENAYVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGFGTANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYSGYNMEDAIIMNKASIERGLGRSTFFRTYEAEEKRYLGGQTDRFEVPDPT
IQGYLGEKYYRHLDEDGIIFPESKVTGKDVLVGRTSPPRFLEEQSGLGGIILQERRETSV
TVRPSERGIVDKVIITETGDGTKLVKVTTRDLRIPEFGDKFASRHGQKGVVGLIVPQEDM
PWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVAALTGRRVDGTAFIGEPEEKLRKEL
EELGFKHSGREVMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKV
YCPVCGEEEKISKVEMSYAFKLLLDELKAMGIRPSLKITDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaccaaccgttgtggatgttactcctgacgacctctggctcgttatg
gacgcctactggaaggagaggggactcgtaaggcagcaccttgattcttacaacgctttc
attgagggcggcatgcagcaggtcatatacgagttcggcggactgaagccggatatcccg
gacttcgaggttaagttcggtaaaatacgcctgggcgaacccgagttccaggaagcccag
gggcagaggaagccgctctacccgatggacgccaggataaggaacctgacctactcggcc
ccgctctacctcgagctcatcccggtcatcaagggcatcgagcaggaacccgttgaagtt
cgcattggagagctcccgataatgctcaagtccaaggcctgcaggctctacggcctcagc
gacgaggagctcatcaagctcggcgaggatccaaaggacccgggaggatacttcatcata
aacggctccgagagggttatagtctccattgaggacctcgccccgaacaagaccctcgtt
gagcgcgacgagaggcagaacaggataatcgcaaaggtcttctcatacaggcacggctac
agggcgctgataaccgtcgagaggaggaaggacggaatactctacgtcaacattccgaac
gtccccaggccagttaagttcgtctacgtcatgcgcgccctcggtcttctgagcgataaa
gagatcgtcgaggccgtgagcgacgatccgaggatacagcaggttctcttcgacaacctc
gaggacgccagcgacgtgatgaaccaggaggatgccctcgactacatcggaaagctctcc
ctgcccggccagccgaaggagtacaggctcaggagggccgagcacataatagacaacaac
ctcctcccgcacatgggcgttgagccggagaggaggaaggccaaagcctattacctcggc
atgatggccctcaaggttctcgagctttccctcggcctccgcggcgaggacgacaaggac
cactacgccaacaagaggctcaagctcgctggagacctcctcagggacctcttccgcgtc
gccttcggtcagctcgtcaaggacatgcagtaccagatgaccaagacctaccagaggaag
ggcgagcgctacaccttcgagaacatccagaggtttgtgagaaactccataagacccgat
gtcctcagcgagaggatcgagcacgctttagcgaccggtgcctggcccggcggaaggacc
ggtgtgagccagcttctcgatagaacgaactacatgagcaccctttcacatctcaggcgc
gtcacttctccgctcagcagagatcagccccacttcgaggcgcgtgatcttcacggaacc
cactggggaaggatctgtccgacggagactccggaaggtccgaactgtggtctcgttaag
aacctctcactgatgtcccagataaccaccggcatccccgaggaggaggtcagggagtac
ctgaacaagctcggtgtcgtttccatcgaggagcgccgcccgagccccgaactctggcgc
ctctacctcaacggagttctcatcgggaccatagaggatggggagtccctcgtccgccgg
ataaggagcgacaggagaagcggaaagataagcgacgtcatcaacgtggcgatataccag
gacgaggaggttagggagatatacgtcaacagcgacgacggtcgcgtcaggagaccgctc
atcatcgtcgagaacggacagccgaagctcaccaaggagcatgtcgatgcaataaagagc
ggggccctcacctggaacgatctggtgaagatgggcatcatagagtacctcgacgcggaa
gaggaggagaacgcctacgtggcaacatggccgtgggaggtcacggaggagcacacccac
cttgagctcatgccggccgcgatactcggtatcccggcttcgctcgttccgtatcccgag
cacaacgccgccccgcgtaacacctacggagcgggtatggccaagcagagcctcggcttt
ggtaccgccaacttcaggataagggtggacacgcgcgggcatctcatgcactacccgcag
gttccgctcgtcaactcacgcatcatgaaggccgtcggtttcgaggagaggcccgctggt
cagaacttcgtggtcgcggttctcagttacagcggctacaacatggaggacgccatcata
atgaacaaggcctccatcgagcgcggtctcggaaggagcaccttcttcaggacatacgag
gccgaggagaagcgctacctcggcggtcagaccgaccgcttcgaggttcccgacccgacc
atacagggctatctcggcgagaagtactaccgccacctcgacgaggacggtataatcttc
ccggagtcaaaggtcacgggtaaggacgttctcgtcggcagaacctcaccgccaaggttc
cttgaggagcagagcggcctcggaggaataatactccaggagagaagggagacgagcgtc
accgtcaggccgagcgagaggggcatagttgacaaggttatcatcaccgagaccggcgac
ggaaccaaactcgtcaaggtgaccaccagggacctccgcatcccggagttcggagacaag
ttcgcatcgaggcacggacagaagggtgtcgtgggtctcatcgttccgcaggaggacatg
ccctggaccgagagcggaatcgttcccgacctcatcgtcaacccgcacggtatcccgagc
cgtatgaccgtcggacagctcatcgaggccataggcggaaaggtcgccgccctcaccgga
aggagggtcgatggaaccgcgttcattggtgagcccgaggagaagctcaggaaggagctt
gaggagctcggattcaagcacagcggcagggaagtcatgtacgacggcataacaggaagg
cgccttgaggccgacatattcgtgggcgtcatctactaccagaggctccaccacatggtc
gccgacaagatgcacgcgcgctcaagaggtccggtccaggttcttacaaagcagccaacc
gagggtagggccagggaaggtggtctcaggttcggtgagatggagcgtgacgtcctcata
ggccacggcgccgcgatgcttctcatagagagactgctcgaggagagcgacaagaccgag
gtatgggtctgcgagagctgcggacacctggcactcgaggacaagcgcagaggaaaggtc
tactgcccggtctgtggagaggaagagaagatcagcaaggtggagatgagctacgccttc
aagctgctgctcgacgagctgaaggctatgggaataaggccgtccctcaagataacggat
agggtgtga
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