KEGG   Thermococcus indicus: FH039_04650
Entry
FH039_04650       CDS       T07099                                 
Symbol
cas3
Name
(GenBank) CRISPR-associated helicase Cas3'
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tic  Thermococcus indicus
Brite
KEGG Orthology (KO) [BR:tic00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tic02048]
    FH039_04650 (cas3)
Enzymes [BR:tic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FH039_04650 (cas3)
Prokaryotic defense system [BR:tic02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    FH039_04650 (cas3)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Cas3_HD AAA_22 DEXQc_Suv3
Other DBs
NCBI-ProteinID: QDA31030
UniProt: A0A4Y5SM38
LinkDB
Position
850648..853572
AA seq 974 aa
MPQMTLDVYYQKSLQKEEPTSKVPNSEKVELLRKILAKSKREEGKDDNFPPYTLVGHVIL
ALNRCVELEKFISSLENIKYPRFANPEDRYIFFKNLAKAIIIHDLGKISLDFQKRLYAPD
KVPHEIWGLLKESKGVKTYGNHELFSLLWSFALLGNSNEDAMIRTAVLLHHYNEFFSQEE
PRITKIIEGDNSNELKYLEFLLCKRDKLEALLMAYLEIIRDKFSAISFIAEAADELIDSM
DFSRLELLKEQMETFGINPSREFPIYNPREQKTSVDFLVFLGMLRRCDYSSSGDFYVEVI
DNLEAIFGDVDSKIKKKIRAKAGTTFKGLWQEELLRKYNSDYLAVIAPTGSGKTELAVLW
AKNRGKLVYTLPLRVALNDLYRRLAKEYFDEEHVGLLHSTAFMEYVEGSGKEVDVEKKVN
AASLLAMPVMLSTPDQVFLTGLNYYGADKVISVYPESAIVVDEVQVYTPEMVSVFLRTLD
LIMQAGGKVLLITATLPPHIRWFLSGFTEDDAKKLRINTDRLPKPLFNFKVLDVAEEFRG
KEENVKNLKIKRHKLDVIEDKVMFQYINENGKMSPTVGPAAFKEIQERLEEFNNNGLKAV
MIVVNNVKKAIELCKSFTETSNEEHRETKEIKCGSWNNWDIYLLHSRLPEKRKQLIIGEV
KKILNEYKDRKEIDRPILLITTQVVEASVDVDFDAMITEISPIDSQVQRWGRVYRNRGGK
HYNEYIKEIREKNKVEENPNGEIPPNIIVFLGDEIDRGTTTVYGKGIGKDVLEKTKEVLK
KLDGKLLGYIEERNAIEEVYSGEILGEYIKQVDELYNKLDYFTLEKKSEAQRVFRQMAGM
YFVVPSLMKKFGDETAKKFGEFLSEPENRRLSWKDVVIGVYGLEEEPPQEKEKKEEWEKK
LKIGKWKLKKILQEYSVNVPLWFVLEDFNLQHALNDTFKGYPVVLTWGKDNAEKLWKFGV
DEVVGDLDAEEDVL
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgccccagatgacacttgatgtgtactatcaaaaatcccttcaaaaggaggaacccact
tctaaggttcctaacagtgagaaggtggaacttttgagaaaaatactcgcgaagagcaag
cgcgaggagggcaaagatgataacttcccaccctatacactcgtcggccacgttatattg
gctttaaaccggtgtgttgagcttgagaagtttatatcaagccttgaaaacatcaaatat
cctcgttttgcgaacccagaggatagatatattttcttcaagaaccttgcgaaggctata
ataattcacgatcttggaaagataagcctcgactttcaaaagaggctctacgctccagat
aaggttccccacgagatttgggggctcctcaaggagagcaagggcgttaaaacctacggc
aaccacgagttgttttccctcctctggagcttcgcccttttgggaaacagcaatgaagat
gcaatgattagaaccgctgtgcttctccaccactacaacgagttcttctctcaggaagag
ccaagaataaccaaaataatagagggtgacaactctaacgagctaaaataccttgaattt
ctactttgcaagagagacaagcttgaggctcttctcatggcttatctcgaaataataaga
gacaaatttagtgcaatcagctttatagcagaggctgctgacgagctcatagacagcatg
gacttctcaaggcttgaactcctaaaggaacagatggagacctttgggatcaacccatcc
agagagttccccatatataatccaagagaacagaaaaccagcgtggacttcttagtcttc
cttggcatgctgagaaggtgtgattactcatcgagcggggacttttacgttgaggtcatc
gataacttggaggctatctttggagacgtggactcaaaaatcaagaagaagataagagcg
aaagcaggaaccaccttcaaaggcctctggcaggaagagcttttgagaaagtacaactct
gactatcttgccgttatagccccaacgggctcggggaagaccgaattggctgttctctgg
gcgaaaaacaggggaaaactcgtgtataccctcccgcttagagtggccctaaacgacctc
tatagacgcctggccaaggagtactttgatgaggaacacgttgggttgttgcattcaacc
gctttcatggagtacgtagagggctcaggcaaagaagtcgacgtcgagaaaaaggtgaac
gccgcgagtttgctcgcaatgccggtcatgctatcaacacctgaccaagtctttctcaca
ggactcaactactatggggccgacaaagtgatttcagtttatccagaatcagcgatagtc
gttgatgaagttcaggtatatactcctgaaatggtctcagtcttcctcagaacccttgac
ctgataatgcaggcaggaggaaaggttctcttaatcaccgcgaccctaccacctcatata
agatggttcctatcgggtttcactgaagatgatgccaaaaagcttagaatcaacactgac
aggcttccaaaaccacttttcaatttcaaagtcttggacgtcgccgaagagttcagggga
aaggaggagaacgttaagaatctgaagattaaaaggcataagctggatgtcattgaggat
aaagtgatgtttcaatacatcaatgagaatggaaaaatgtctcctacggtaggaccagcg
gctttcaaagaaatacaagagcgccttgaagagttcaataacaatggccttaaagctgtc
atgatagtcgtaaacaacgtgaagaaggccatcgagctgtgtaaatccttcacagagacg
agtaatgaagaacacagggaaaccaaggaaatcaaatgcgggagctggaacaactgggat
atctaccttcttcattcaaggctcccagaaaagagaaaacaactcatcataggagaggta
aagaaaattctcaacgaatacaaagatagaaaagaaatagacaggccaattctcttaata
acaactcaggttgttgaggcttcggttgatgttgacttcgatgcgatgataacggaaatt
tctcccatagacagccaagtccagaggtggggtagggtctacaggaacaggggaggaaag
cactacaatgagtacataaaagagattagagagaaaaacaaagttgaggagaacccaaat
ggagaaatcccgccgaacataattgttttccttggagatgaaatcgatagaggaaccacc
accgtttatggcaaaggaatcggtaaagatgtccttgagaagacaaaagaagtccttaaa
aaactcgatggaaaactccttggatacattgaggaaaggaatgctattgaggaagtatac
agcggggagattcttggggaatacataaaacaagttgatgaactctataacaagctcgac
tacttcaccctcgaaaagaagagcgaagcccaaagagtcttccggcagatggcagggatg
tactttgtcgtcccctctctgatgaagaagtttggggatgaaaccgccaagaagttcggt
gagttcctcagcgaacctgaaaaccgcaggcttagctggaaagatgttgtaatcggagtc
tatgggcttgaggaggagcctccgcaggagaaagaaaaaaaggaggaatgggagaaaaaa
ctgaaaataggaaaatggaagctcaaaaagatcctccaggagtactcggtgaacgttccg
ctatggttcgttctggaggacttcaaccttcaacatgctctcaacgataccttcaagggc
tatccagtggttctaacatggggcaaagacaatgccgagaagctctggaagtttggagtt
gatgaagtcgtcggtgacctcgatgcagaagaggatgtgctgtga

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