KEGG   Thermococcus indicus: FH039_05190
Entry
FH039_05190       CDS       T07099                                 
Name
(GenBank) 16S rRNA methyltransferase
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
tic  Thermococcus indicus
Pathway
tic03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tic00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FH039_05190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tic03009]
    FH039_05190
Enzymes [BR:tic01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     FH039_05190
Ribosome biogenesis [BR:tic03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    FH039_05190
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-ProteinID: QDA31116
UniProt: A0A4Y5SJV5
LinkDB
Position
complement(960401..961060)
AA seq 219 aa
MLHLVIAEAELELVPKAILDHPAVVNHARRRGKRPDEILLDSTYHHAAIKKLPDGERRGR
PDIVHICLLNALESIANKEGLLRVYVHTRNDEVIYIKPETRIPRNYNRFVGLMESLFKNR
AVPRDLELLRIEEKSLGELVEEIKPDGIFVMHEEGELIKPKDLGKMLGELENPLVIVGGF
PHGDFRSEVPWKKISIYEAPLMAWTIVNEIITNFEHWVP
NT seq 660 nt   +upstreamnt  +downstreamnt
atgctccacctggtgatagctgaggctgagcttgagctcgtcccgaaggccatactggac
catcctgccgttgtaaaccacgccaggaggcggggaaagaggccggacgagatactgctg
gacagcacctaccaccacgcggccatcaaaaagcttccggacggcgagaggcgcgggcgg
ccggacatagtccacatctgcctcctcaacgccctcgagagcattgccaacaaggagggc
ctgctgagggtctacgtgcacacgaggaacgacgaagtgatatacatcaagccggagacg
aggatcccgaggaactacaaccgcttcgttgggctgatggagagcctcttcaagaaccgc
gcggttccgagggacctggagctgctccgcatcgaggagaagtccctcggagagctcgtg
gaggagataaagcccgatggaatcttcgtgatgcacgaggaaggcgaactgataaagcca
aaggacctcgggaagatgctgggcgaacttgagaacccactcgtcatcgtcggcggcttt
ccccacggggattttagaagcgaagtcccctggaaaaaaataagcatttacgaggccccg
ttgatggcctggacgattgtaaacgagataatcaccaactttgagcattgggttccctga

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