Thermococcus indicus: FH039_08410
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Entry
FH039_08410 CDS
T07099
Symbol
infB
Name
(GenBank) intein-containing translation initiation factor aIF-2
KO
K03243
translation initiation factor 5B
Organism
tic
Thermococcus indicus
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tic03012
]
FH039_08410 (infB)
Translation factors [BR:
tic03012
]
Eukaryotic type
Initiation factors
eIF-5
FH039_08410 (infB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
Intein_splicing
GTP_EFTU_D4
IF-2
LAGLIDADG_3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
LAGLIDADG_WhiA
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QDA32460
UniProt:
A0A4Y5SQX3
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All DBs
Position
1536277..1539702
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AA seq
1141 aa
AA seq
DB search
MRRIRQPIIAVLGHVDHGKCLLPSETVVVPELGRITLKELFELGGRVIESDEEKEIRELF
LPVTSAGANARISVGTGTHVWRLRHRGRMVKVRLKNWHSVGVTPEHPFLTTKGWKRADQL
RPGDYVAVPRFLHANESRDIFVRFVRKKLSTPELIAKLREDALEKVKEKFRGEKEYKVRS
NVFRAEDLDGLWDAVERIAFTPRIHRSGKPLHYVRLPETDEEWKALFYFAGVMFGDGSQD
KIANNDVEVFERLKAVESLGVELLRVRRRTSWEIEIRNGKNALIRLIRVLFDYPERQKAR
SITAPDILFIAPREYVAEFLRGYFDADGHVSLKDVRIEITSASREFLEELSLVLLRFGIV
SKLYRSDYTTLVISGRRNLEAFRKLIDFTVKEKAERLERVVEKSKKSETYPIFEELKRLR
LLFGFTRTELNSFVPFYSKYESSEAPSYETLMRILDAIERGSPTLVKKLAVLEGKARNHN
YLLALEKDGLIKGGKLTDLGRELLEVWRNREFDSRDVAYVRNLAENFVFVPVEEIEEFDY
DGYVYDLTTETHNFVANGILVHNTTLLDRIRRTNVAGKEAGGITQHIGATEVPIETVKGL
AGPLMKLWKGEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLIVDINEGFQPQTIESI
EILRKNRTPFIVAANKIDRIKGWKVEEDEPFLVNIKKQDQRAQQELETKLWELIGKFYEM
GFQANRFDRVQNFTRELAIVPISAKYGIGVPELLVLIAGLSQKYLEEKLKIEVEGPARGT
ILEIREEVGLGTTLDVIIYDGTLRKDDTIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFR
FDQVEEVAAAAGIKIAAPGLEEALAGSPVIAARSEEDVEKARQEILSQIQSVVISTGKVG
VIVKADTLGSLEALSKELQEKGIPIRKADVGNISKTDVMEALSVREEEEKYGVVLGFNVR
VNEDAEEVAKAKGVPIFTGNIIYKLIEDYEEWIRAEEEKKKRELLSKVTFPGVIRLYPDE
RYVFRRSHPAIVGVEIVEGRIRPGVALIKQNGQKIGVIKSIKNKNDFVQEARKGDAVAIA
IEGAMVGRHIHPGETLYVDLSKNDVIILAKQLKNELDETDIKALKMTAKVKAQQDPFWKA
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggataagacagcccatcatagcggttctcggtcacgttgaccacggcaagtgc
ctgcttccgagtgagaccgtggtggttccagagctgggcaggataaccctcaaagagctc
ttcgagctcggtgggagggtcatcgagagtgacgaggagaaggagataagggagctcttc
ctcccggtgacgtccgctggagctaacgcaagaatatcggtcgggactggaacccacgtg
tggcgtctcaggcacaggggaaggatggtgaaggtcaggctcaagaactggcactcggtc
ggcgtcacgccggagcacccgttcctgacgacaaaggggtggaagagggcagaccagctc
agacccggtgattacgttgctgttccaaggttcctgcacgccaacgagagcagggacatc
ttcgttcgctttgtgagaaagaagctctcaacgccggagctgatagcgaagctcagggag
gatgctcttgaaaaagtcaaggagaagttcaggggagagaaggaatacaaggttcggtca
aacgtgttccgggccgaggatcttgacgggctctgggatgccgttgagaggatagcgttc
accccaaggatacaccgctccggaaagcccctgcactacgtaaggctaccggagactgac
gaggagtggaaggcgctcttttacttcgccggcgttatgttcggcgatggaagccaggac
aagatagccaacaacgacgtcgaggtcttcgagaggctcaaggctgtggaatccctcggg
gtcgagctcttgagggttaggcgcagaacgtcctgggagattgaaatcagaaacggtaag
aacgccctgataaggctcatccgcgttctctttgattatccagagagacagaaggccagg
agcataacggctccggatatcctgttcatagccccgagggaatacgttgcggagttcctc
cgcggatactttgacgcggatggccacgttagcctcaaggatgtcaggattgaaataacc
agcgcgtcgcgggagttccttgaggagctctccctcgtcctcctgaggttcggcatagtc
tcaaagctctaccgctccgactacacgaccctcgtgatttccggaagaaggaaccttgag
gcgttcaggaagctgatcgacttcacggttaaggaaaaggccgagcgccttgagagagtc
gttgagaaaagtaaaaagagcgaaacctatccaatattcgaggaactcaaacgcctcagg
ctactctttggattcacgaggacggagctgaactcgttcgttccgttctactcaaagtat
gagtccagcgaggcgccgagctacgagaccctaatgaggattctcgacgctatagagagg
ggctcgcctacgctcgtcaagaagcttgctgtgcttgagggaaaagccaggaaccacaac
tacctcctcgccctcgaaaaggacggcctaataaagggcggaaaactcaccgacctcgga
agggagctccttgaggtctggcgcaacagggagttcgattcgagagatgttgcctacgtc
cgcaacctcgcggagaacttcgtgttcgtcccggttgaggaaattgaggagttcgactac
gacggctacgtctacgacctgacgaccgagacccacaacttcgtcgccaacggaatcctc
gtgcacaacacaactctccttgacagaatcaggcgcacaaacgtcgccggcaaggaagcc
ggtggaataacccagcacattggtgcgactgaagtgcctattgagaccgtcaaagggctc
gccggcccgctgatgaagctctggaagggtgagataaagctcccgggactgctcttcatc
gacactcccggtcacgaggccttcacgagcctgcgcgcgaggggagggagcctggccgat
ctggcggttctcatcgtggacatcaacgagggcttccagccgcagacgatagagagcatc
gagatactcaggaagaacaggacgcccttcatcgtggccgccaacaagatagacaggata
aagggctggaaggtggaggaggatgagcctttcctcgtgaacatcaagaagcaggaccag
cgggcgcagcaggagcttgagaccaagctctgggaactcattggaaagttctacgagatg
ggcttccaggcaaaccgcttcgaccgcgtccagaacttcacccgcgagctggcgatagtc
ccgatatccgccaagtacggtatcggcgtccccgaacttctcgtcctcatcgcaggtctc
agccagaaatacctcgaggagaagctcaagatcgaggttgaagggccggcgcgcggcacc
atactggagatacgcgaggaagtcggcctgggaaccacgcttgacgtcatcatctacgac
ggaaccctcaggaaggacgacaccatcgtggttgggggcaaagataaggcgatagttaca
aaaatccgcgccctcctcaagccgaagcccctcgacgagatacgcgacccgaggttccgc
ttcgaccaggttgaagaggtcgccgccgcggcgggtataaagatagccgccccgggactt
gaggaggctttagccggctcgccagttatagcggcccgctcggaggaggacgttgaaaag
gccaggcaggagatcctgagccagatacagagcgtcgtcataagcaccggcaaggtgggc
gtcatagtcaaggcggacaccctcggaagcctcgaagccctcagcaaggagctccaggag
aaggggatccccataagaaaggccgacgtagggaacatcagcaagaccgacgtgatggaa
gctttaagcgttcgcgaggaggaagagaagtacggcgttgttctgggcttcaacgtcagg
gtgaacgaggacgctgaggaggtcgccaaggccaaaggcgttcccatattcaccggcaac
atcatctacaagctcatcgaggactacgaggagtggatcagggctgaggaggagaagaag
aagcgcgaactcctcagcaaggtcaccttcccgggcgtcataaggctctacccggacgag
aggtacgtcttcaggaggagccaccccgcgatagtaggcgttgagatcgtggagggccgc
ataagacccggagtggcgctcatcaagcagaacggccagaagatcggcgtcatcaagtcc
atcaagaacaagaacgacttcgtccaggaggccaggaagggcgacgccgttgcgatagcc
atcgagggcgcgatggtcggcaggcacatccacccgggagagacgctctacgttgatctg
agcaagaacgacgtcataatcctcgccaagcagctcaagaacgagctggacgagaccgac
ataaaggcgctgaagatgacggcgaaggtgaaggctcagcaggatccgttctggaaggcg
gtttga
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