Thermococcus indicus: FH039_08695
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Entry
FH039_08695 CDS
T07099
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
tic
Thermococcus indicus
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tic03009
]
FH039_08695
Ribosome biogenesis [BR:
tic03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
FH039_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Fer4_RLI
SMC_N
Fer4_6
Fer4
Fer4_21
Fer4_7
AAA
AAA_24
Fer4_10
nSTAND3
Fer4_9
Rad17
AAA_16
AAA_14
Fer4_2
AAA_22
RNA_helicase
AAA_18
ORC-CDC6-like
VapE-like_dom
AAA_23
Fer4_3
AAA_30
NACHT
DO-GTPase2
SRP54
AAA_25
NB-ARC
Fer4_16
Fer4_4
Fer4_8
Motif
Other DBs
NCBI-ProteinID:
QDA31660
UniProt:
A0A4Y5SNT6
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All DBs
Position
1597173..1598948
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AA seq
591 aa
AA seq
DB search
MRIAVIDYDRCNPDKCGNFLCERVCPVNRMGGEAIIIDEENYRPVIQEASCTGCGICVHK
CPFNAITIVNLPEELEEGCVHRYGVNAFVLYRLPVVKDGMVVGILGPNGTGKTTAVKILS
GQLLPNLCGDNEDWDNVIRAFRGNELQNYFEKLKNRQIKPVVKPQYVDLIPKAVKGKVRD
LLKRADEAGKFEEVVRELELENVLDRDIKHLSGGELQRVAIAAAILRDAHFYFFDEPSSY
LDIKQRLKVARIIRHLADSGKAVLTVEHDLAVLDYLSDVIHVVYGKPGAYGIFSQPKGTR
NGINEFLRGYLKDENVRFRPQEIRFTKSSERKSQEGEILVEYPRLVKDYGGFRLEAEPGT
LYMGEVVSIVGPNGIGKTTFVKMLAGVEKPTEGEVDWELKVSYKPQYIKVDYEGTVYDLL
SKINAGKLLNSFYKTELLNPLGVPDLYDKKVNELSGGELQRVAITAALIRDADLYLLDEP
SAYLDVEQRLAVSRAIRHLMEKEGKTALVVEHDVLMIDYISDRLMVFEGEPGKHGKALPP
TGMREGMNRFLAGVGITFRRDPDTGRPRANKENSVKDREQKEMGEYYYVAP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagcggtcatcgattacgacaggtgcaatccggacaagtgcggcaacttcctg
tgtgagagggtttgccccgtcaatcgaatgggcggagaggcgataatcatagacgaggag
aactaccgcccggtgattcaggaggcgagctgtaccggctgcggaatctgtgtgcataag
tgtcccttcaacgcgataaccatagtgaacctccctgaggagcttgaggagggctgtgtg
catcgctacggagtaaacgccttcgtcctctacaggcttccggttgtcaaggacggcatg
gtggtcggtatcctcggaccgaacggaaccggtaagactaccgcggttaagatactctcc
ggccagctcctgccgaacctgtgcggcgacaacgaggactgggacaacgttatcagggca
ttccgcggcaacgagctccagaactacttcgagaagctcaagaaccggcagattaaacct
gtggtcaagccccagtacgtggacttaatccccaaggcggtcaagggcaaggttcgggac
ctgctcaagagggccgacgaggcgggcaagttcgaggaggtcgtaagggagctcgagctg
gagaacgtcctcgacagggacataaaacacctctccggcggtgagcttcagcgcgtggcc
atagccgcggcgatactcagggacgcgcacttctacttcttcgatgagccgtccagttac
ctcgacataaagcagaggctcaaggtggccaggataatccgccatctggcagattcgggc
aaggcggttctcaccgttgagcacgacctggcggtcctggattacctcagcgatgttatc
cacgtcgtctacggtaagcccggcgcctacggtatattctcccagccgaagggcacgcgc
aacggaataaacgagttcctgcgcggctatctgaaggacgagaacgtccgcttcaggccc
caggagataaggttcacaaaatccagcgagaggaagagccaggagggcgagatactggtt
gagtacccgaggctggtgaaggactacggcggcttcaggctcgaggccgagcccggaacg
ctctacatgggcgaagttgtgagcatcgtcggccccaacggaatcggtaagacgaccttc
gtgaagatgctcgcgggcgtcgagaagcccaccgagggagaggtcgattgggagctgaag
gtttcctacaagccgcagtacatcaaggttgactacgaggggaccgtttacgatctcctg
agcaagataaacgcggggaagctcctcaacagcttctacaagaccgagctcctgaacccg
ctcggcgtcccggacctctacgacaagaaggtgaacgaactctcgggcggtgaacttcag
agggttgcaataaccgccgccctcatccgcgacgcggacctgtacctgctcgacgagccc
tccgcttacctcgacgtcgagcagaggttggcggtttcgagggcgataaggcacctgatg
gagaaggagggcaagaccgctctcgtcgtcgagcacgacgttctcatgatagactacatc
agcgacaggctgatggtcttcgagggcgaacccggaaagcacggcaaagctttgccgccc
accgggatgcgcgagggaatgaaccgcttcctcgcgggggtcggcataaccttccgccgc
gacccggacacgggcaggcccagggccaacaaggagaacagcgtcaaggacagggagcag
aaggagatgggcgagtactactacgtcgccccgtga
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