Thermococcus indicus: FH039_09140
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Entry
FH039_09140 CDS
T07099
Name
(GenBank) PGF-pre-PGF domain-containing protein
KO
K20276
large repetitive protein
Organism
tic
Thermococcus indicus
Pathway
tic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH039_09140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_7
PKD
Bac_rhamnosid_N
DUF4959
Motif
Other DBs
NCBI-ProteinID:
QDA31729
UniProt:
A0A4Y5SNF0
LinkDB
All DBs
Position
1685178..1694246
Genome browser
AA seq
3022 aa
AA seq
DB search
MCLIVREPLSLLAFSPESQEIAILANETATFEISLNQIANVTWSVNGSPTLSEETSISMY
SNSSLIPGNWNVSVRAENKNGNVTLWWLMRVREADRAPPALMFTEPTPENGSLINTSRVT
FNLTANEELSKAILELDGVPYTMQGSGRNWWVTLELPDGLHTFRATGEDVHGNTNSTTEA
SFEIDTAPPEISVEAPEVVERGEETRATVVITDSHPDFYRIILNGEVIAEGQYSSGEGIQ
LEPNTSSSGNLTYTVEARDGAGNGASLGFTIRVVDTTPPEVWFIPPTPENGSILGRSRLT
FNLTANENLSAAVLEIDGSNHTMEGSGTAWVLTLQVPDGEHVFRAYGTDESGNVGHSETR
VIETDTTPPIVHDQFVNLTLEWERDGIYSTHAERGVRAGLLINVTEPHPGHYDVYFNPDA
NDPNNGWVMLYSGNYTDGVPFFVPFNTSEPAYVMYYITIYDALEHGAYGKYFFLRVRDTT
PPAKIEVLVVTTFVGGAEVAWINPSDDDFNHTELWLDGSLIGNFSAAPGLWDGTTLTLTP
GETYNISVVPVDRYGNRGDATWKVVTIPYPSLNAGYVPPTPPDGTELPPDTDEIKIRIES
EDSFASCALSWDGQYYNLQVKTAWRNYVDDRGHIHTKLIYYCEKTFSGHLNGEHSFFAVV
GDGYGHFRSLPTRHLTVLWPCFENCRLELNSVEMNYMTLRIPINFTLDTNAMPSGYSYSL
SNLGLEETFEPNVTSRWVGERLLVTGSYVLDLREILPNLGKKDPESLERILSGEEPLELQ
ITARGPCGNEVSGGAAFTVCRGNERPSLKVKLDGEYRPGESVVPVVEATDPNGNLEGVYI
SINGAEYMEYTAGMDISSYLVPYSTNVVRIKAVDLCGASTVVTVKVRITGPPVNGSWVVD
GPQNCVNKEYTVNGSLLITSSGSLEMRNCRIHVLGRKVEVNGTLRVLEGSLIEGGRLEGY
GGSVSIEDSALKSTGGGTLADGTFTAIDSFLAGEFSFDMTPIEIEESTVEGGVSGNWEVT
VRNAMFTSGSGLTLVNPSSVTVENVSFIDCDYGLRLLDGLPLEMTFRNIKIDSPRGAGIK
VDVFPAFGEVEFVNVTIEGGGVELSGVTVRFENSRISSEGSAFTLDMAGKALTLVNSSVS
GDEAFRASHLQTLELRNTNVTGSISGEIANLEIDVEKGAEAFMKSGEARNADLLVEGIMT
LRSYTLDGGLALVLGNGTFKMEDLDGVPATSDLDEDASVLRNIRVEFPEEGHLSLLNSRL
ENVTLVSNSKWVFIRGSVVNGYLSLSSNEDSMEQEISTENPIMQESSWYYSKSTPSADWY
RSTSTDGMSEGNGPFVTDWSYDPLGWSGVYSEIREFSELYLKRTINVEEMPLRALFYYSA
VGRVEVYVNGRKVVSEEDYTPDYRVNFWTGLHGVPHTNVVDIAAYLVPGRNLIAVKVTLP
DEYPYTSIGAFKATLQTESGVAGITDSIIRGEVKGYGTRAIFARDDVNADIEFGYLSWVS
ISDSKVHGGIKVLGRLSVENSELEGNGSGNGIDTGRDWSHVSVRDSTIRNFERGIKAIGE
LTVNGSEISGNRIGISTRGSVVHIESSYITDNDIGIELSNVTGEIRNNVIYSNGIGIHQW
MGSDDEYGYDRGNHLTIWHNTIVSNDLGARFDGKPYSIGGVGFYYNLVQNNELGLYINDT
TGLGIRNDSLINEKDVYITSETRLTPSLMGIDWGGHLPVRVLNYSAGVMYTESGDVEENY
DVLDMSWRALVAREGTTEEDWGSNLLSAFLDIEPMEGNTVQGVITLRGRASSRNGLSRVE
YWVVHDGNVTTVLNATVNGSLYDDYVVLDTAGMNLTGKGLLAFRATDSRGRTLSCLRGVY
FDNGRLVITNVTVRNATNIYTLYRVIYETLEDGTEYPAEWLPYTDRFANITVGLENIGSL
NGTARIEIDLPEFIESHTGKVDQWIALPPNTSGVFYAAIPIVDYDWTTLTWTATPDELPQ
YDRFQATVRLYDLDNNLLDEREITVGFTLGPVFEITSYNMYAYSRAYCESYPDYCHQEPP
YDGDGDDVVEAAESHHFDFGYKNVGDVKAIVKIIDVDDNILEKSRETGRMMSKSAYLFPG
SSALKDAGSSGTNLFGEVGIDETRLAMDLYMDWWTDLPPVFIPPVNYSGPYITNALFYYG
IGDNNDTVYYSPSLNYKKRSVRALNKTFVPQTVFLNPLEIKVVAVKDGKTYLTLRNTHDE
VYYDYYAYGYFGAMEGWKWYNLLPPGFTMRAVAEDSLEPNKVIPHYRVIVGTKPSLIGNE
FKVIATAIEGILGILGVDVPVELIAVTSGKVLLKMVNLADTVDFQSESETFSDLAKGSQK
NETDEALVSSNETVIAVVDTDTFARLEENYGMDRSYYQKVKHLDELDFDEQMDVLAKFGK
AVVMDDDMQTLFLDTLFEVLFSFDQLETYKTTYDVIKASYQVGAGVAHGNAGESAGGAAS
LFAMGSKKAAKTLAKELVLSELKKSKSFRSLKPADQKKMLKKTKKGVASLVATTLEISEF
VATVVLAPQGGSKVIYVLDPPGNYTVRAEESEGMLVFGGSGGEGLGRGNVSLTFGERDVY
RASYVALTQSLPLGRLFNGTLEEMAVRLDGRRNGNMTGNLTMVIKPAPEKAKYVIAAFRD
EEVAKGFAGSYLSGISSLSVSMEGNLILLRAKGTVNAQPEDEEIHLNVTVNRDTLRASIV
RIGYYRNVEIRSSFGVPLNETTVEVRGENVTVGSGQESVVISRTEERPNITISSEKVIEG
EKLFIHTSTPCSLSWRLGNVSGSGNFVATAGVEPGNYSLLVECTYGGGKAEERFPVRVVS
RPLVRNATDGALVSLKEGLQGFFEFGTDLYFLSFKALSDLGGVLGVYQRSGSVEAPEGYR
YVTYALFNVTHPANWSVENVTIKFRVSKEWLRENNVSREEVLLIHRENGWVEYRPNLERE
DRRYVYYRAKVPSLSLFAVAGKVKVETQEEPTQTETETPTQSGSQESPSQTTPAPERGNA
PYYLLAALAILALVGIYLYRRG
NT seq
9069 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctcatcgtcagagaacccctcagccttctggcattctccccggaaagccaagaa
atagcaatcctggccaacgaaacggcaacttttgagataagcctaaaccagatcgccaac
gttacgtggtcggtgaacggaagccccaccctcagcgaggaaacctcaatttccatgtac
tccaactcaagcctgataccgggcaattggaacgtcagcgttagggcggagaacaagaac
ggcaacgttaccctctggtggctcatgagggtcagagaagccgatagagcgcctcccgct
ttgatgttcacggaaccaaccccggagaacggttccctgattaacacgtcgagggttacc
ttcaacctgaccgccaacgaggagctttcaaaggccattcttgaactggacggggtccca
tacaccatgcagggctcggggagaaactggtgggtcacgctggagctgccggatggcctc
cacacgttcagggccacgggagaagacgtccacggaaacacgaactccaccaccgaggca
agctttgagatagataccgcccccccggagataagcgtagaagcccccgaggtcgtggag
aggggagaagaaaccagggcaacggttgtaataaccgattctcacccggacttttacagg
ataatcctaaacggcgaggtcattgcagaggggcaatactccagcggggaagggattcag
ctcgaaccaaacacatcatcctccggaaacctgacctacaccgttgaagcccgggacggg
gcaggaaacggggcaagccttggcttcaccatccgggttgtggacacgaccccaccagag
gtgtggttcattccacccaccccagagaacggctccattttgggaaggtcacggctcacc
ttcaacctcaccgccaacgagaacctctcggcggcggttcttgaaatagatgggagcaac
cacacgatggagggcagcgggaccgcatgggtcctgacccttcaggttcccgacggggag
catgtttttagggcctacgggacggatgagagcgggaacgttgggcacagcgaaaccagg
gtcatcgagaccgacaccactcctcctatcgtccatgatcagttcgtaaacctcaccctt
gagtgggagagggacgggatatactcgactcacgcagagaggggagtccgggccggactg
ctcatcaacgtcaccgagccccaccctggccactacgacgtctacttcaacccggacgcg
aacgaccccaacaacggctgggtgatgctctactccgggaactacaccgatggggttccc
ttctttgtgcctttcaacacgagcgaaccagcgtacgtcatgtactacatcacgatatac
gatgccctcgagcacggggcctacggaaagtacttcttcctgcgcgtgagggacacgact
cccccggcaaaaatagaggttctcgtcgtcacgacgttcgtgggcggtgcggaagtggcg
tggatcaacccgagcgacgacgacttcaaccacacggagctgtggctcgatggaagcctt
atagggaacttctcggcggcccctggcttgtgggacgggacaaccctcacgctcactccc
ggggagacctacaacatctcggtcgttccggttgacaggtatggaaacaggggcgatgca
acgtggaaggtcgtgacgataccgtatccgagccttaacgccggctacgttcccccaact
ccccccgatggaaccgagctgcccccggacactgacgagataaagatacggatagagtcg
gaggacagttttgcatcgtgcgccctttcgtgggacggccagtactacaacctccaagtc
aagacggcgtggaggaactacgtcgacgacagggggcacatccacacgaagctcatctac
tactgcgagaaaaccttctccgggcacctgaacggggagcacagcttcttcgccgttgtg
ggggacggctacgggcacttcaggtcgctaccaacgaggcacctaaccgttctgtggccg
tgctttgagaactgccggcttgagctgaactcggttgagatgaactacatgacgctccgc
atacccatcaacttcaccctcgacaccaacgccatgccatcgggttactcctattcactg
agtaaccttggcctggaggaaacatttgagccaaacgtcacgagccggtgggtcggcgag
aggcttctcgtaaccggtagctacgttctcgacctccgggagattctcccgaatctcgga
aagaaagaccccgaaagcctggagaggatacttagcggggaggaaccgctggagctccag
attaccgcgagggggccctgcggaaacgaggtgtctgggggagcagctttcacggtctgc
cggggcaacgagaggccgagcctcaaggtaaagctcgacggagagtaccggccgggcgag
agcgtcgttccggtggttgaggccaccgacccgaacggcaaccttgagggggtttacata
tcgatcaacggggcggagtacatggagtacacggccggcatggacatctcgagctacctc
gtcccctacagcaccaacgtcgtccggataaaggcagttgacctgtgcggagcttcaacg
gtggtcactgtgaaggtcagaataaccgggccaccggtgaacgggagctgggtggttgat
gggccccagaactgcgtaaacaaagaatacacagtgaacgggagccttctaataacttcg
agcggctccctcgagatgaggaactgcaggattcacgttttgggaagaaaagtcgaagtg
aacggcaccctcagggtccttgaaggctctctgatagagggcggcaggctggaaggctac
ggaggcagcgttagcatcgaagactcagccctgaagagcacgggtggcggaactcttgct
gatggaacgttcacggccatcgactcgttcctggccggggagttctccttcgacatgact
ccgattgagatagaggaaagcacggtcgagggaggcgtgagcggaaactgggaggtcacc
gtgaggaacgccatgttcacgagcggaagcgggctaacgctcgtcaacccctcctcggtc
accgtcgagaacgtgagcttcattgattgcgactacgggttaaggctcctcgacgggctt
ccgttggagatgaccttcaggaacatcaaaatagacagccccaggggggcggggataaaa
gtagatgtcttcccggcttttggggaggtcgagttcgtcaacgtgaccatcgaaggaggc
ggcgttgagctttcgggggtaaccgttcgcttcgaaaactccaggataagctcggaggga
agcgccttcaccctggacatggcggggaaagccctgacgctcgtaaactcctccgtatcg
ggcgatgaagccttccgggcaagccacctccagaccctcgagctgaggaacaccaacgtg
accgggagcatttcgggtgagatagcgaacctggagatagacgttgaaaaaggcgcggag
gcattcatgaaaagcggggaagctcggaacgccgaccttctcgttgaaggaatcatgacc
ctgaggagctatacccttgacggaggactcgcgctcgtcctggggaacggaaccttcaag
atggaagacctcgacggagtgcccgccaccagcgatttggacgaagatgcgagcgttttg
aggaacatcagggtagaattcccggaggaggggcacctgagtctcctcaactccaggctt
gagaacgtcaccctcgtctcgaactcgaagtgggtcttcataagggggagcgttgtaaac
ggatatctcagccttagctcgaacgaagattccatggagcaggagatatccaccgagaac
cccataatgcaggagagcagctggtactactcaaagagcaccccctccgcagactggtat
cgctcaacctcgacggacggcatgagcgaggggaatggtcccttcgttaccgactggagc
tacgatcccctcggctggagtggggtgtactcggagattcgggagttttcggagctctac
ctcaagagaacgataaacgtggaagagatgcccctgagggcccttttctactacagcgcg
gttggtagggttgaggtgtacgtgaacggcagaaaggtggtcagcgaagaagattacacc
cccgactaccgggtgaacttctggaccggccttcacggcgttccacacaccaacgtagtt
gacatagcggcctacctggttcccgggaggaacctgatagcggtaaaggtgaccctgcca
gatgagtatccctacacctcaataggggcctttaaagcaaccctgcagacggaaagcggg
gtcgcggggataaccgacagcatcatcaggggagaggttaaaggctacggaacgagggcg
atattcgccagggacgacgtgaacgcggatattgagttcggctacctctcgtgggtctcc
atctcggattccaaggttcacgggggaatcaaagtcctcggaaggctcagcgttgagaac
tccgaactagaaggaaacggctccggaaacggaatagacaccggtcgggactggtcgcac
gtgagcgtcagggattccacgataaggaacttcgagcggggcatcaaggcaataggcgag
ctcaccgtgaacgggagcgagataagcgggaacaggataggtataagcaccaggggctcg
gttgttcacatcgaaagctcctacataacggacaacgacatcggcattgaactgtcaaac
gtcaccggagaaatccgcaacaacgtgatatactccaacggaatcgggatacaccagtgg
atggggagcgacgacgaatacggctacgacagaggcaaccacctcacgatatggcacaac
acgatcgtgtccaacgacctcggcgcccgtttcgacgggaagccctacagcatcggaggg
gttggcttttactacaacctcgtccagaacaacgaactcggcctttacatcaacgacacc
accggtctcggaataaggaacgactccctgatcaacgagaaggacgtctacataacctcg
gaaacccggctgacaccgtccctcatgggaatagactggggcgggcacctcccggttcgg
gtcctcaactactccgccggcgtgatgtacacggagagcggcgacgtggaggaaaactac
gacgtcctggatatgtcctggagggccctggtggccagggaaggaacgacggaggaggac
tggggttcaaaccttctctcggctttcctcgatatagagcccatggaggggaacaccgtt
cagggagtaatcaccctcaggggaagggcatcctcacggaacgggctgtcgagggtggag
tactgggtcgtccacgatgggaacgtgacgaccgtactgaacgccaccgtgaacggaagc
ctctacgacgactacgtggttctcgacaccgcagggatgaaccttacaggaaagggcctc
ctcgcattcagggcaacggattccagagggaggactttgagctgtctcaggggagtgtac
ttcgacaacgggaggctggtcatcaccaacgttacggtcagaaacgcgaccaacatctac
accctctaccgggtgatatacgagaccttagaggacggaacggagtatcccgcagaatgg
ctaccatacacggacaggttcgccaacatcaccgttgggctggagaacatcggctccctc
aacggtaccgccaggatagagatagacctgccggagttcatcgagagccacaccggaaag
gtggatcagtggatagccctgccgcccaacacctccggggtgttctacgccgccataccg
atagtcgactacgactggacgacgctcacatggacggctacgcccgacgaactgccgcag
tacgaccggttccaggcgacggtgaggctctacgacctcgacaacaacctgctcgacgag
agggagataactgttggcttcaccctcggcccagtcttcgagataaccagctacaacatg
tatgcgtacagcagggcgtactgcgagagctatcccgactactgccaccaggagccgccc
tacgacggggacggcgacgacgtggtcgaggcggccgagagccaccacttcgacttcggc
tacaaaaacgtgggcgacgtcaaggccatcgtgaagataatcgacgttgacgacaacatc
ctcgagaagtccagagagacgggccgtatgatgagcaagagcgcctacctcttcccaggc
tcctcggcattgaaggacgctggttcctctggaacgaacctttttggcgaggtgggaata
gacgaaaccaggcttgcaatggacctgtacatggactggtggaccgacctgccaccggtt
ttcatacccccggtgaactacagcgggccttatatcaccaacgccctcttctactacggc
ataggggataacaacgataccgtttactacagcccgagcctgaactacaagaaacggtcc
gtcagggccctcaacaagaccttcgttccgcagacggttttcctgaacccgctggaaatt
aaggtggtggccgtcaaggacggcaaaacgtacctaacgctccgcaacacccacgacgag
gtctactacgactactacgcctacggctacttcggtgcgatggagggatggaagtggtac
aacctccttccaccgggcttcacgatgagggccgttgcagaggacagcctcgagcccaac
aaggtgattccccactaccgggtgatagtcgggaccaagccgtccctcatcgggaacgag
ttcaaggtgatagccacggcaatagagggcatcctgggcattttgggggttgacgttccc
gttgaactcatagcggtcacctccggaaaggttctcctgaagatggtgaacctggcggac
accgttgacttccagagcgaatcggagacgttctcggacctggccaagggctcccagaaa
aatgaaaccgacgaggccctcgtttcgagcaatgaaacggtcatagcggtcgttgacacc
gacaccttcgccagactggaggagaactacgggatggacaggagctactaccagaaggtc
aaacatctcgacgagctcgatttcgacgagcagatggacgttctggcgaagttcggtaag
gctgttgtcatggacgacgacatgcagaccctgttcctcgacaccctctttgaggtcctc
ttcagcttcgaccagctggaaacctacaagaccacgtacgacgttatcaaggcgagctac
caggttggagccggagtggcccacgggaacgccggggagagcgccggcggtgcggcatct
ctgtttgcgatgggcagcaaaaaggccgcaaaaaccctcgccaaggagctggttctcagt
gagctcaagaaaagcaagagcttcaggagcctgaagcctgcagatcagaaaaaaatgctc
aaaaagaccaagaagggcgtggcttctttagtcgcaacgaccctggaaatctcggagttc
gtagccactgttgtcctggctccccagggaggctcgaaggtgatatacgtcctcgatccc
cccggcaactacaccgttagagccgaggaaagtgaggggatgctcgtcttcggaggttcc
ggcggtgaaggcctgggaagggggaacgtctcgctgacattcggcgagagggacgtttac
agggccagctacgttgccctgacccagagccttccgctggggaggctcttcaacgggacg
ctcgaggagatggccgttaggcttgatgggagaagaaacggaaacatgaccggcaacctc
acgatggtcatcaagccggcaccggagaaggcgaagtacgttatagcggcgttccgcgat
gaggaggttgcaaagggctttgcgggaagctatctctcgggcatctccagcctgagcgtc
tccatggagggcaaccttatcctcctgagggctaaaggcacggttaacgcccagcccgag
gacgaggagatacacctaaacgttactgttaacagagacacgctccgcgcgagcatcgtc
aggataggctactaccgcaacgtcgaaatcaggtcctccttcggggttccgctcaacgag
acgaccgtggaggtaaggggggagaacgtcaccgtcgggagtggccaggaaagtgtggtg
atatccagaaccgaggaacgccccaacatcacgatatcctccgagaaggttattgagggc
gagaagctgtttatccatacctcaaccccgtgttcgctgagctggaggctcggcaacgtt
tccggttccgggaactttgtggccacagcaggcgttgagccaggcaactactcgctcctg
gtggaatgcacctacggcggcgggaaggccgaggagaggttccccgtccgcgtggtttca
agacctctcgtcagaaatgccaccgatggagccctggtgagcctcaaagaaggcttgcag
ggcttcttcgaattcggaacggacctatacttcctgagcttcaaagccctgagcgacctg
ggaggagttctcggcgtttatcagcgctcaggaagcgtggaagcgccggagggatacagg
tacgtcacctacgcgctctttaacgtcacccacccggccaactggtcggtggagaacgtt
acgataaagttcagggtctcaaaggaatggctgagggagaacaacgtaagccgggaggag
gttctcctaatccaccgcgagaacggctgggtggagtacagaccaaacctcgagcgcgag
gatcggaggtacgtttactaccgcgccaaggttccatcgctttccctcttcgccgtcgcg
ggcaaggtaaaggtcgaaacgcaggaggagcccacccagacggaaacggaaacgcccacc
caaagcgggagccaggaaagcccgtcccagacaacgccggcaccggaaaggggaaacgcc
ccctactacctcctcgcggcgctggcaatcctggcgctggtcgggatttacctgtacagg
agggggtaa
DBGET
integrated database retrieval system
