Thermococcus indicus: FH039_09415
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Entry
FH039_09415 CDS
T07099
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tic
Thermococcus indicus
Pathway
tic03022
Basal transcription factors
tic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FH039_09415
09124 Replication and repair
03420 Nucleotide excision repair
FH039_09415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tic03021
]
FH039_09415
03036 Chromosome and associated proteins [BR:
tic03036
]
FH039_09415
03400 DNA repair and recombination proteins [BR:
tic03400
]
FH039_09415
Enzymes [BR:
tic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FH039_09415
Transcription machinery [BR:
tic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FH039_09415
Chromosome and associated proteins [BR:
tic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FH039_09415
DNA repair and recombination proteins [BR:
tic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FH039_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_30
AAA_19
SNF2-rel_dom
IstB_IS21
HerA_C
Antimicrobial17
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDA31775
UniProt:
A0A4Y5SLW8
LinkDB
All DBs
Position
1748385..1750292
Genome browser
AA seq
635 aa
AA seq
DB search
MTDYFPYENLRPNQRDFIELVSKAVENGENVIIEAPTGFGKTVSVLAGVLPHAKEMGYKV
LYLARTHRQMDRVIEELKAIRGKSPVSGVELRSRKDLCLHTYLTQFTSDAYTAMVVCKNL
KKLGKCEFYENEKKKKAEFDELVRFFLGEPSHPAEILDYSQTLELCPYDLTKRIAEKADV
IVASYLYLLSPTIRENFISSLDVDYSDLIVVFDEAHNLPDQAISALSDKISINTINRAIK
EADEYNEHEIANFLSILGRGLEILFQEKLANRDVQETAIQPELVFSHVVEVLGLDTRWLV
KTLNDMVAVGDSIREDRIEKGKPPRSYIGRVGEFLLLWLSLIGREDYLFLMSRDRGLSLE
LVALDPSKALGFIKDVQSAIFMSGTLTPLEAFRDVMGVENARLKKFPRMVKRENAQVLVA
KDVSTRGDERSLQVYRKMVDYIVEAAKIIPKNVGVFAASYEVLQGLLSANLQVRLEETGK
AVFIEKQGVSSAENDLMVAQFKAHARGNGAVLLGVMGGRNSEGQDYSGDEMNGVVLVGIP
YARPTPRVQARIRYFERKFPEKGRYYGYYLPAHRKLVQAAGRVHRSAEEKGSIVVLDYRL
LWRGIKKDLPDWMVETVRPVDLGRMRLYLKRFWAT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactactttccatacgaaaacctgcgaccgaaccagcgcgatttcatagaactg
gtctcaaaggcagttgaaaacggagagaacgtcatcatcgaggcacccacgggattcgga
aagaccgtgagcgtcctggcgggagtactcccccacgccaaggaaatgggctacaaggtg
ctctacctggccagaacccacaggcagatggacagggtcatagaggagctaaaggcgata
agggggaagagccccgtttccggcgttgagctcaggagcaggaaggacctctgcctgcac
acgtacctcacccagttcacgagcgacgcctacaccgccatggtcgtctgcaagaacctc
aaaaagctcgggaagtgcgagttctacgagaacgaaaagaagaaaaaagcggagttcgac
gagctggtgcgcttcttcctcggggagccgagtcaccccgcggagatactcgactactcg
cagaccctggagctgtgcccctacgatttaaccaagaggatagcggagaaggcggacgtg
atagtcgccagctacctctatctcctcagccccaccatacgggagaacttcataagctcg
ctcgacgtcgattactctgacctcatagtggtcttcgacgaggcccacaaccttccggat
caggcgatttcagcactcagcgataaaataagcataaacacgattaacagggcaataaaa
gaggccgatgagtacaacgagcacgagatagcaaacttcctgagcatcctgggcaggggg
ctggagatactgttccaggaaaaactggcgaacagggacgtccaggagaccgccatccag
ccagagctggtgttctctcacgttgtcgaggttcttggattggacacgaggtggctcgtc
aagacactcaacgacatggtggcggtcggggattcgataagggaggacaggatagagaag
ggcaaacccccccgctcctacatcgggcgcgtcggcgagttccttctcctgtggctctcc
ctcatcggaagggaggactacctgttcctcatgagcagggacagggggctgagcctcgag
ctcgttgcccttgatccatccaaggccctgggcttcataaaggatgtccagagcgcgata
ttcatgtccggaacgctcaccccgcttgaggccttccgcgatgtcatgggcgtggaaaac
gcccgcctgaagaagttcccgaggatggtaaagcgcgagaacgcccaggttctggtggcc
aaagacgtctcgacgaggggcgatgagcgctcgctccaggtttacaggaagatggtggac
tacatagtggaagcggcgaagataatcccaaagaacgtcggggttttcgcggcatcctac
gaggttctccagggtcttctatcggcgaacctccaggtcaggctggaggagacgggaaaa
gcagtcttcatcgagaagcagggtgtctcttcggctgagaacgacctcatggtcgcccag
ttcaaggcccacgcgaggggcaacggggcggtactgctcggcgtgatgggtggcaggaac
agcgaggggcaggactacagcggggacgaaatgaacggcgtggtgctcgtcggaatccct
tacgcgaggccaacgccgagggttcaggccaggataaggtacttcgaacgcaagttcccg
gagaagggcaggtactacggctactacctgccggcccacagaaagctcgtccaggctgcg
ggaagggtgcaccgctcggccgaggagaagggttcgatagtggtcctcgactaccgtctg
ctctggagagggataaagaaagacctgccggactggatggtggaaacggtgagacccgtt
gatctgggaagaatgcggctctacctcaagaggttctgggctacctaa
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