Thermococcus indicus: FH039_10115
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Entry
FH039_10115 CDS
T07099
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
tic
Thermococcus indicus
Pathway
tic02020
Two-component system
tic02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH039_10115
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FH039_10115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tic02035
]
FH039_10115
Bacterial motility proteins [BR:
tic02035
]
Flagellar system
Chemotaxis proteins
MCPs
FH039_10115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
HAMP
ATG17_like
Laminin_I
Prominin
DUF948
HAMP_2
Fib_alpha
BORCS6
Sec8_N
NPV_P10
TMP_3
STX6_10_61_N
GAPES1
DUF4110
Spectrin_Anc-1
ERM_helical
DUF1664
MFS_MOT1
sCache_2
TACC_C
Mce4_CUP1
PepSY_TM
Laminin_II
CENPH
RPW8
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QDA31888
UniProt:
A0A4Y5SLX0
LinkDB
All DBs
Position
1871690..1873933
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AA seq
747 aa
AA seq
DB search
MEFKKKVIGIVVVALLLVTAIAGAMMLYTGNNTAKLIETKMAPLVEEQAQDAVMAQATAI
AAEFQGFFSTVEALGSATAGSVELSLKQLQLEGVDFGDPGYADKLRPLLMEHFAVIADSE
KALSGVYFGDANGNMFIYPHQDLPEGYDPRVRPWYQEAVKKNGPTWSEPYQDASTGKWVV
TYAIPVHYNGRLVGVVGLDVYIDTLTKRIDEVTIGDTGYVTVAGANGMTYMHPNHDYIMN
LNVFDVPALKPIANIIRSGKDRDVVTYTFNGVQAVSAGVKIPSTGWYVFAKVPVSEVSGG
VIKVIEDTKETTSKSALMLSLIILVISAVLIGVSYRMVSHSIKPLEELRRVAQALAEGRL
SDVSKQLNQIHYIEDDEIGALIKAFEAVGKDLVGTLNTIADKLERLAEGDLSNGMSMEAK
GELKEILEDLRDTTHKLKGLIGEIVNVTNELDKKANILTQITTDVTEAINQVNEAVQQVS
IEAQRQQESINEITEGMRFVSETSAESVRAMDEFEAAVNEVVTIANEGRQKGETSARQIE
SIQQTMSEIEESVRKVAEMSRSIEEITNVITNIAEQTNLLALNAAIEAARAGEAGRGFAV
VAQEIRKLAEESKQAADNIKNIIDQITGEIRDAVDSTQRGVSVVGESAETLRETITYLGN
IADLLQDASSRMGEVKEQIVRTQDEVENALRSLENLAASAEETTASAEEVSSAVEEQTAA
TEELERAAKDLKNIVENLRDIIGRFKL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaagaagaaggtgataggcatagttgttgtggcgctcctgctggtgacagcg
atcgccggggcaatgatgctctacactggcaacaacaccgcaaagctcatcgagaccaag
atggctcccctcgttgaggagcaggcacaggatgcagtgatggcccaggctaccgccata
gccgctgagttccaggggttcttcagcaccgtggaggcccttggcagtgccaccgcgggc
tccgtcgagctgtccctcaaacagctccagcttgagggtgtggacttcggcgaccccggc
tacgccgacaagctcaggccgcttctcatggagcacttcgcggtcatagcggactcggag
aaggccctcagtggcgtgtattttggcgatgcaaacggcaacatgttcatataccctcac
caggacctgcccgagggttacgacccgagggtcaggccgtggtaccaggaagccgttaag
aagaacggcccgacgtggagcgagccgtaccaggacgcgtcaaccggaaagtgggttgtt
acctacgcgattcccgtccactacaacggcaggctcgtcggcgtcgtgggcctggacgtc
tatatagacaccctgacgaagaggatagacgaggtcaccataggggacaccggctacgtg
accgtggcgggagccaatgggatgacctacatgcaccccaaccacgactacataatgaac
ctcaacgtctttgacgtgccggcactcaaaccgatcgctaatatcatacggagcggaaag
gacagggacgtcgtgacgtacacgttcaacggagttcaggccgtctcggcaggcgtcaaa
atacccagcaccgggtggtacgtcttcgccaaggtcccggtcagcgaggtgagtggaggg
gtaatcaaggtcatagaggacaccaaggagaccacctcaaagtcagccctcatgctcagc
ctcatcatcctggtaatatcagcggtgctgataggggtctcctacaggatggtgtcccac
tccattaagccgcttgaggagttgaggcgggtcgcgcaggctctcgccgagggaagatta
agcgacgtgagcaaacaactcaaccaaatccactacattgaagacgacgaaatcggagcc
ctcataaaagccttcgaagccgtcggaaaagacctagtcggaacactcaacaccatagct
gacaagctggagcgcctggccgagggcgatttgagcaacggcatgagcatggaagccaag
ggagagctcaaggaaattctcgaagacctgagggacacaacccataagctcaagggcctc
atcggcgagatagtgaacgtcaccaacgaactcgacaaaaaagccaacatcctcacccaa
atcacaaccgacgtaacagaagccatcaatcaggttaatgaagcagtacagcaggttagc
attgaggcccagaggcagcaggaaagcatcaacgaaataaccgaaggaatgcgcttcgtc
tcagaaacaagcgccgaaagcgtcagagcaatggacgaattcgaagcagccgtaaacgaa
gtcgtcacaatagccaacgaaggcagacaaaaaggcgaaacctctgccagacagatagag
agcatccagcagacgatgagcgaaatcgaggagtccgtcaggaaggttgctgagatgagt
aggagtattgaggagattacgaatgtgattaccaacattgccgagcagacgaatctcctg
gctttgaacgctgcgattgaggcggcgagggctggcgaggctggaagaggcttcgctgtg
gtcgcccaggagattaggaagcttgcggaggagagtaaacaggctgcggacaacatcaag
aacatcatcgaccagattaccggcgaaatccgcgacgcagtagacagcacccagcgcggc
gtttcggtggtcggtgagagcgccgagaccctgcgtgagacgataacctacctgggcaac
atagctgatctgcttcaggatgcgagttcgaggatgggtgaggttaaggagcagattgtt
aggacgcaggatgaggttgagaatgctttgaggtctcttgagaacctggctgcgagtgcc
gaggagaccacggcttcagcggaggaggtaagctcggcagttgaggagcagactgcggca
acggaagaactcgaaagagccgccaaagacctcaaaaacatcgtggaaaacctgagggac
ataatcggcaggttcaaactctaa
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